DRSC/TRiP Functional Genomics Resources

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Protein Alignment sgl and plch2a

DIOPT Version :9

Sequence 1:NP_476980.1 Gene:sgl / 38760 FlyBaseID:FBgn0261445 Length:476 Species:Drosophila melanogaster
Sequence 2:XP_009302541.1 Gene:plch2a / 100334231 ZFINID:ZDB-GENE-030131-6367 Length:1557 Species:Danio rerio


Alignment Length:121 Identity:24/121 - (19%)
Similarity:39/121 - (32%) Gaps:33/121 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   323 SDKRIAILGFAFKKNTGDTRETAAITVCQTLLEEGAALDIYDPKVEPEQIID------------- 374
            |.:||..|...|.::.|.:.:|...|..:....||.......|.|.||...|             
Zfish  1184 SSQRIQALKAVFDRDIGRSMQTGLRTPVRRSKSEGQMKKADGPSVVPEVCTDATLNDRLWSKLDP 1248

  Fly   375 --------------------DLTHPSVTESPEKVKKAVQIHSDPYSAVRATHALVI 410
                                ||:.|:::........|.:.:||..:::...|..||
Zfish  1249 SSHRDSVSSSSSISSNDTVIDLSLPNLSRKSLTCLSAARDYSDKQASLTNNHRSVI 1304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sglNP_476980.1 PLN02353 1..459 CDD:177986 24/121 (20%)
plch2aXP_009302541.1 PH_PLC_eta 86..192 CDD:270170
EFh 210..276 CDD:238008
EF-hand_7 211..272 CDD:290234
PLN02952 252..910 CDD:178538
EF-hand_like 280..361 CDD:286375
PI-PLCc_GDPD_SF 362..770 CDD:301322
C2_PLC_like 800..924 CDD:175974
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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