DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sgl and plcb3

DIOPT Version :9

Sequence 1:NP_476980.1 Gene:sgl / 38760 FlyBaseID:FBgn0261445 Length:476 Species:Drosophila melanogaster
Sequence 2:XP_005166590.1 Gene:plcb3 / 100001532 ZFINID:ZDB-GENE-030616-594 Length:1245 Species:Danio rerio


Alignment Length:470 Identity:86/470 - (18%)
Similarity:153/470 - (32%) Gaps:134/470 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 KKCRNVNLFFSTDIETAIKEADLIFISVNTPTKTCGNGKGRAADLK------YVESAARMIAEIA 116
            ||...::.|..|.....:|.:...|:..|....:....||...|..      :.....:|:|...
Zfish   592 KKFFEMSSFVETKGMDTLKNSPTEFVEYNKKQMSRIYPKGTRVDSSNYMPQLFWNVGCQMVALNF 656

  Fly   117 QSNKIVVEKSTVPVRAAESIMHILRANQKPGIHYDILSNPEF--------------LAEGTAIN- 166
            |:..:.::.:          |.:...|.:.|    .|..|||              :.:|...| 
Zfish   657 QTLDLAMQLN----------MGVFEYNGRCG----YLLKPEFMRRTDKHFDPFTTDIVDGIVANT 707

  Fly   167 --------DLLNADRVLIGGEETPEGHQAVEKLSWIYEHWIPKQNILTTN------TWSSE---L 214
                    ..||..:|.:..|....|..|..|         .|....|:|      .|..|   .
Zfish   708 VKVKIISGQFLNDKKVGVYVEVDMFGLPADTK---------RKYRTKTSNNNSLDPVWDDETFVF 763

  Fly   215 SKLAANAFLAQRISSINSLSAVCEATGADVSEVARAVGLDSRIGSKFLQASV---GFGGSCFQKD 276
            :|:......:.|:       ||.|..|             ..||.:.|..|.   |:...|. |:
Zfish   764 NKVVLPTLASLRV-------AVYEENG-------------KFIGHRILPVSALRPGYHYICL-KN 807

  Fly   277 ILNLIYICENLNLPEVAAYWQQVIDM--NEYQKRRFSQKIIESLFNTVSDKRIAIL--------- 330
            .||     :.|.||.:..| .:|.|.  ||:      |:..|:|.|.:  |.:::|         
Zfish   808 ELN-----QPLMLPSLLVY-TEVQDYIPNEH------QEYAEALTNPI--KHLSLLAQRESQLLA 858

  Fly   331 -------GFAFKKNTGDTRETAAITVCQTL--LEEGAALDIYDPKVEP------EQIIDDLTHPS 380
                   |...|:..||..:::.:|....:  |.....|......:.|      |.:::::....
Zfish   859 LMEDPTEGGPTKQEEGDGTDSSCVTSADPIFPLPSSPTLPSVPTDLNPPPSGQKEDLVNNVLKVI 923

  Fly   381 VTESPEKVKKAVQIHSDPYSAVRATHALVICTEWDEFVDLDFKRIYQSMMKPAYIFDGRKILDHE 445
            ..||.:::|:    |:.....::..     |.|:.|......|::.....:...:|:.:......
Zfish   924 EPESVDELKQ----HNSYLKLLKKQ-----CKEFKELSKKHLKKMLALSKEQKTLFNQQSSELQR 979

  Fly   446 RLQQIGFHVQTIGKK 460
            :..||...::|..||
Zfish   980 KRSQIEKRIRTSLKK 994

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sglNP_476980.1 PLN02353 1..459 CDD:177986 84/467 (18%)
plcb3XP_005166590.1 PH_PLC_beta 22..151 CDD:270167
PLN02952 209..820 CDD:178538 52/276 (19%)
EF-hand_like 226..316 CDD:286375
PI-PLCc_beta 318..673 CDD:176533 14/90 (16%)
C2_PLC_like 707..825 CDD:175974 31/153 (20%)
DUF1154 922..957 CDD:284131 7/43 (16%)
DUF4456 <934..1051 CDD:291317 11/66 (17%)
PLC-beta_C 1014..1185 CDD:285865
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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