DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9948 and stwl

DIOPT Version :10

Sequence 1:NP_648063.1 Gene:CG9948 / 38757 FlyBaseID:FBgn0035721 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_524068.2 Gene:stwl / 39581 FlyBaseID:FBgn0003459 Length:1037 Species:Drosophila melanogaster


Alignment Length:209 Identity:42/209 - (20%)
Similarity:66/209 - (31%) Gaps:57/209 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LIDLVEPNPVLYKRSGLSNYDAMKAKTDIWARIAEMMGCDVDFCLMRWNNLHYQFRK------EF 73
            |:..||....||.|:. .||.......:.|..:|..:|..|:.|..||..|...:.:      ..
  Fly    11 LLRSVEKQTALYDRTD-ENYRKRLPSENAWDMVASEVGESVEKCKRRWRQLRNDYTRWCNADANR 74

  Fly    74 RRADTSGSTWPYLERLRFL----------AEIQPPSKVKTKPKTNKQE----------------- 111
            ||.......:|..:.||||          |.....|....|.:.|.::                 
  Fly    75 RRNGQRRLAYPLADELRFLDRHLNIADDMAADDDRSVSSDKDRDNNRDSEGVDHHAQASLKERAS 139

  Fly   112 ------------ATIQTETPVQFLWDTFEDGDVPQQSSTFIIEEVIEEPSEQIIQEEIIYEEQEP 164
                        :.::.|...|...:.:|:....|:|.....||.:.:           .||.:.
  Fly   140 STSKLVKEVKLASQVRKEKSSQDKRENWENPGDKQRSRKKSAEEKLND-----------LEESDE 193

  Fly   165 AEIISPRSSFLQMD 178
            .|.:....||||.|
  Fly   194 PEKVPELDSFLQSD 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9948NP_648063.1 MADF 14..95 CDD:214738 24/95 (25%)
stwlNP_524068.2 MADF 11..98 CDD:214738 23/87 (26%)
COG5177 <131..>267 CDD:227504 15/88 (17%)
BESS 604..637 CDD:460758
Blue background indicates that the domain is not in the aligned region.

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