DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9948 and hng3

DIOPT Version :10

Sequence 1:NP_648063.1 Gene:CG9948 / 38757 FlyBaseID:FBgn0035721 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_612057.1 Gene:hng3 / 38090 FlyBaseID:FBgn0035160 Length:333 Species:Drosophila melanogaster


Alignment Length:159 Identity:38/159 - (23%)
Similarity:60/159 - (37%) Gaps:40/159 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 IWARIAEMMGCDVDFCLMRWNNLHYQFRKEFRR--------ADTSGSTWPYLERLRFL------- 92
            :|..:||..|.||:.|..:|.||...:|:..||        :.:.|..|.|.|.:.||       
  Fly    33 LWNAVAEATGMDVELCRTKWKNLRCSYRRSNRRSGILKHQQSPSPGHQWSYAEAMSFLDGQREEC 97

  Fly    93 -------AEIQPPSKVKTKP-------KTNKQEATIQTETPVQFLWDTFEDGDVPQQSSTFIIEE 143
                   .|::...|::.:.       |:.:..|..:.|.....|...|::...||         
  Fly    98 DNSNNGEEEMESALKIEAEHMPMLSTFKSEQVSAADEMEADNDALMREFQNVSTPQ--------- 153

  Fly   144 VIEEPSEQIIQEEIIYEEQEP--AEIISP 170
            .:...||.|.......|||.|  |:.:||
  Fly   154 ALRRLSENISLASAAAEEQVPSTADQLSP 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9948NP_648063.1 MADF 14..95 CDD:214738 19/73 (26%)
hng3NP_612057.1 MADF 5..91 CDD:214738 18/57 (32%)
BESS 240..274 CDD:460758
Blue background indicates that the domain is not in the aligned region.

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