DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9948 and madf-9

DIOPT Version :9

Sequence 1:NP_001261492.1 Gene:CG9948 / 38757 FlyBaseID:FBgn0035721 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_500389.2 Gene:madf-9 / 191167 WormBaseID:WBGene00022608 Length:333 Species:Caenorhabditis elegans


Alignment Length:141 Identity:37/141 - (26%)
Similarity:64/141 - (45%) Gaps:20/141 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 FDFKLIDLVEPNPVLYKRSGLSNYDAMKAKTDIWARIAEMMGCDVDFCLMRWNNLHYQFRKEFR- 74
            |:.:||..|:..|.||.:|. ..|:.:..:...|..|||.:....:....||..|..:::||.: 
 Worm    49 FNIRLIAEVKARPFLYDQSD-EGYNLLSWRNSAWNEIAENLETTSEHVKTRWKTLRDRYKKEEKK 112

  Fly    75 -RADTSGSTWPYLERLRFLAEIQPPSKVKTKPKT--NKQEATIQTETPVQFLWDTFEDGDV-PQQ 135
             |.....|:|.:...|:|   ||...|.:...:|  |:.|..::.|          .:|.| |.:
 Worm   113 ERVSKKASSWVFQRPLKF---IQAHLKDRHTDETDSNQSEPAVKPE----------PNGHVSPME 164

  Fly   136 SS-TFIIEEVI 145
            :: :||..|:|
 Worm   165 AAMSFIENELI 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9948NP_001261492.1 MADF 14..95 CDD:214738 22/82 (27%)
madf-9NP_500389.2 MADF 52..136 CDD:214738 24/87 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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