DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9948 and si:zfos-128g4.1

DIOPT Version :9

Sequence 1:NP_001261492.1 Gene:CG9948 / 38757 FlyBaseID:FBgn0035721 Length:218 Species:Drosophila melanogaster
Sequence 2:XP_002661969.1 Gene:si:zfos-128g4.1 / 100334256 ZFINID:ZDB-GENE-141212-382 Length:248 Species:Danio rerio


Alignment Length:119 Identity:37/119 - (31%)
Similarity:55/119 - (46%) Gaps:17/119 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 KLIDLVEPNPVLYKRSGLSNYDAMKAKTDIWARIAEMMGCDVDFCLMRWNNLHYQFRKEFR---- 74
            |||..|...||||..| |.:|.:.:.:...|..:|..:|..|..|..||..:..::.:|.|    
Zfish     8 KLIQTVYAFPVLYNVS-LHDYRSTERRVKAWREVAASVGLSVVECKRRWKTIRDRYIRERRLCKL 71

  Fly    75 RADTSGST---WPYLERLRFL-AEIQP---PSKVKTKPKTNKQE----ATIQTE 117
            :.|..|..   ||:.|.|.|| |.|:.   ||..: .|:..:||    |.:|.:
Zfish    72 KKDLGGRRLHYWPHRESLAFLDAHIRKRRRPSGAQ-GPEEEQQEEHSSAALQED 124

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9948NP_001261492.1 MADF 14..95 CDD:214738 29/88 (33%)
si:zfos-128g4.1XP_002661969.1 MADF 8..97 CDD:214738 29/89 (33%)
BESS 208..242 CDD:281011
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.