DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10077 and DDX23

DIOPT Version :9

Sequence 1:NP_001261491.1 Gene:CG10077 / 38756 FlyBaseID:FBgn0035720 Length:818 Species:Drosophila melanogaster
Sequence 2:NP_004809.2 Gene:DDX23 / 9416 HGNCID:17347 Length:820 Species:Homo sapiens


Alignment Length:459 Identity:180/459 - (39%)
Similarity:257/459 - (55%) Gaps:49/459 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 WSEVNLTPFRKNFYKPCDSVLARTVGETETFLTSNEITIKGDQVPTPSIEFEEGGFPDYVMNEIR 173
            ||:           |..|.:..|   :...|.....||.||.::|.|...:::...|.:::..|.
Human   357 WSQ-----------KKLDEMTDR---DWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVID 407

  Fly   174 KQGFAKPTAIQAQGWPIAMSGRDLVGVAQTGSGKTLAYVLPAVVHINNQPRLER----GDGPIAL 234
            |.|:.:||.||.|..||.:..||::|||:||||||.|:::|.:|.|...|:::|    ..||.|:
Human   408 KCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAI 472

  Fly   235 VLAPTRELAQQIQQVAIEFGSNTHVRNTCIFGGAPKGQQARDLERGVEIVIATPGRLIDFLERGT 299
            :|||||||||||::..|:||....:|...:.||..:..|...|..|.||||||||||||.||...
Human   473 ILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRY 537

  Fly   300 TSLKRCTYLVLDEADRMLDMGFEPQIRKIMQQI-----RPD---------------------RQV 338
            ..|.||||:||||||||:||||||.::||::.:     :||                     ||.
Human   538 LVLSRCTYVVLDEADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQT 602

  Fly   339 LMWSATWPKEVRQLAEEFLNNYIQVNIGSLSLSANHNILQIVDVCDENEKLMKLIKLLTDISAEN 403
            :|::||.|..|.:||..:|.....|.|||.. ..:..:.|.|.:..|:||..||:.:|   ....
Human   603 VMFTATMPPAVERLARSYLRRPAVVYIGSAG-KPHERVEQKVFLMSESEKRKKLLAIL---EQGF 663

  Fly   404 ETKTIIFVETKKRVDEITRNISRQGWRACAIHGDKSQQERDFVLSSFRNGRHSILVATDVAARGL 468
            :...||||..||..|.:.:::.:.|:.||.:||.|.|::|:|.||:.:.|...||||||||.||:
Human   664 DPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGI 728

  Fly   469 DVDDVKFVINYDYPSNSEDYVHRIGRTGRSNNTGTAYTLFTHSNANKANDLIQVLREAN-QTINP 532
            |:.||..|:|||...|.|||:||||||||:..:|.|.|..|..::....:|.|.:.|:. .:..|
Human   729 DIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILESPVSSCPP 793

  Fly   533 KLMN 536
            :|.|
Human   794 ELAN 797

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10077NP_001261491.1 PTZ00110 49..544 CDD:240273 180/459 (39%)
DEADc 159..364 CDD:238167 98/234 (42%)
HELICc 375..507 CDD:238034 58/131 (44%)
DDX23NP_004809.2 RS domain 1..221
PTZ00121 <4..>351 CDD:173412
SF-CC1 80..>210 CDD:273721
Q motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU00552 391..419 7/27 (26%)
DEADc_DDX23 402..628 CDD:350703 97/225 (43%)
DEAD box. /evidence=ECO:0000255|PROSITE-ProRule:PRU00541 549..552 2/2 (100%)
SF2_C_DEAD 639..768 CDD:350174 59/131 (45%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D183201at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

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