DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10077 and AT1G20920

DIOPT Version :10

Sequence 1:NP_648062.2 Gene:CG10077 / 38756 FlyBaseID:FBgn0035720 Length:818 Species:Drosophila melanogaster
Sequence 2:NP_173516.1 Gene:AT1G20920 / 838685 AraportID:AT1G20920 Length:1166 Species:Arabidopsis thaliana


Alignment Length:841 Identity:245/841 - (29%)
Similarity:372/841 - (44%) Gaps:241/841 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 GGAGMFQRNRSAPYPGF-------------NGHGP--ANGG--QRRMNGGGPSMGPGGPRNQDGF 88
            ||.|........|...|             ||..|  .|.|  ..:|||     ...|.|.:.||
plant   370 GGDGAVDEEEIDPLDAFMNTMVLPEVEKFCNGAPPPAVNDGTLDSKMNG-----KESGDRPKKGF 429

  Fly    89 GGQNG----GQRSSNHGAHLPK----------------------------IVWSEVNLTPFRKNF 121
            ....|    |:.|.:..:. ||                            :..|::...||||||
plant   430 NKALGRIIQGEDSDSDYSE-PKNDDDPSLDEDDEEFMKRVKKTKAEKLSLVDHSKIEYEPFRKNF 493

  Fly   122 YKPCDSVLARTVGETETFLTSNEITIKGDQVPTPSIEFEEGGFPDYVMNEIRKQGFAKPTAIQAQ 186
            |.....:...|..|..|:....|:.:.|..||.|...:.:.|....:::.::|..:.||..||.|
plant   494 YIEVKDISRMTQEEVNTYRKELELKVHGKDVPRPIKFWHQTGLTSKILDTMKKLNYEKPMPIQTQ 558

  Fly   187 GWPIAMSGRDLVGVAQTGSGKTLAYVLPAVVHINNQPRLERGDGPIALVLAPTRELAQQIQQVAI 251
            ..||.|||||.:|||:|||||||.:|||.:.||.:||.:|.|||||.||:||||||.|||.....
plant   559 ALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELVQQIHSDIR 623

  Fly   252 EFGSNTHVRNTCIFGGAPKGQQARDLERGVEIVIATPGRLIDFLERGT---TSLKRCTYLVLDEA 313
            :|.....:|...::||:...||..:|:||.|||:.||||:||.|...:   |:|:|.|:||:|||
plant   624 KFSKPLGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEA 688

  Fly   314 DRMLDMGFEPQIRKIMQQIRPDRQVLMWSATWPKEVRQLAEEFLNNYIQVNIGSLSLSANHNILQ 378
            |||.||||||||.:|:|.|||:||.:::|||:|::|..||.:.||..:::.:|..|: .|.:|.|
plant   689 DRMFDMGFEPQITRIIQNIRPERQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSV-VNKDITQ 752

  Fly   379 IVDVCDENEKLMKLIKLLTDISAENETKTIIFVETKKRVDEITRNISRQGWRACAIHGDKSQQER 443
            :|:|..|:::.::|::||.:.|.:.  |.::||:::::.|.:.|::.:..:...::||.|.|.:|
plant   753 LVEVRPESDRFLRLLELLGEWSEKG--KILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDR 815

  Fly   444 DFVLSSFRNGRHSILVATDVAARGLDVDDVKFVINYDYPSNSEDYVHRIGRTGRSNNTGTAYTLF 508
            :..:|.|:|...::|:||.||||||||.:::.|:|:|.|::.||||||:|||||:...|.|.|..
plant   816 ESTISDFKNDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFI 880

  Fly   509 THSNANKANDLIQVLREANQTINPKLMNMAMNGGYNKRGGGMGGGYRGGNGY-----QGRNPQMG 568
            :..:|..|.||::.|..:.|.:...|..:|                   :|:     ||.....|
plant   881 SEDDAKYAPDLVKALELSEQPVPDDLKALA-------------------DGFMVKVKQGIEQAHG 926

  Fly   569 GGYNGGNNYRNNNGPGATMNRNSFNGGSAGGPPRFDQKPRTSPPNQGGQGGYRGQGGGGYQGQQQ 633
            .||                                                    ||.|:     
plant   927 TGY----------------------------------------------------GGSGF----- 934

  Fly   634 QQQQQNGGVPFSRFNPNAACFEPNKPQNGPGSGPPQAQHQQQQQAQAAQQQHLLPDASVQAAMTA 698
                        :||                    :.:.:.::.|:.||               |
plant   935 ------------KFN--------------------EEEEEVRKAAKKAQ---------------A 952

  Fly   699 ANYGVDQKRSRFSPYNMNFANMPPPAMNQQQAAAAQQQQQQQLQTPQQQQQQQQMQQPQAYGQYS 763
            ..||.::.:|.....|..........::||||..||                             
plant   953 KEYGFEEDKSDSEDENDVVRKAGGGEISQQQATFAQ----------------------------- 988

  Fly   764 SMSSSMATVSLNGGAAAVASSYRAPYAVPTQA---APYMMANGGDIFAYP------PPPLP 815
                          .||:|::.:|..|.|..|   |..::||||.:.|.|      .|.||
plant   989 --------------IAAIAAAAKAAAAAPVSAPVTANQLLANGGGLAAMPGVLPVTVPTLP 1035

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10077NP_648062.2 DEAD-like_helicase_N 49..544 CDD:475120 200/546 (37%)
AT1G20920NP_173516.1 PTZ00121 <205..369 CDD:173412
DEADc_DDX46 518..739 CDD:350711 107/220 (49%)
SF2_C_DEAD 750..880 CDD:350174 51/131 (39%)
KH-I_AtRH42_like 1063..1165 CDD:411903
Blue background indicates that the domain is not in the aligned region.

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