DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10077 and AT3G09620

DIOPT Version :10

Sequence 1:NP_648062.2 Gene:CG10077 / 38756 FlyBaseID:FBgn0035720 Length:818 Species:Drosophila melanogaster
Sequence 2:NP_001327248.1 Gene:AT3G09620 / 820119 AraportID:AT3G09620 Length:990 Species:Arabidopsis thaliana


Alignment Length:635 Identity:211/635 - (33%)
Similarity:316/635 - (49%) Gaps:111/635 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 SEVNLTPFRKNFYKPCDSVLARTVGETETFLTSNEITIKGDQVPTPSIEFEEGGFPDYVMNEIRK 174
            |::...|||||||.....:...|......:....|:.:.|..||.|...:.:.|....:::.::|
plant   350 SKIEYEPFRKNFYIEVKDISRMTQDAVNAYRKELELKVHGKDVPRPIQFWHQTGLTSKILDTLKK 414

  Fly   175 QGFAKPTAIQAQGWPIAMSGRDLVGVAQTGSGKTLAYVLPAVVHINNQPRLERGDGPIALVLAPT 239
            ..:.||..||||..||.|||||.:|||:|||||||.:|||.:.||.:||.:|.|||||.||:|||
plant   415 LNYEKPMPIQAQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPT 479

  Fly   240 RELAQQIQQVAIEFGSNTHVRNTCIFGGAPKGQQARDLERGVEIVIATPGRLIDFLERGT---TS 301
            |||.|||.....:|.....:....::||:...||..:|:||.|||:.||||:||.|...:   |:
plant   480 RELVQQIYSDIRKFSKALGIICVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITN 544

  Fly   302 LKRCTYLVLDEADRMLDMGFEPQIRKIMQQIRPDRQVLMWSATWPKEVRQLAEEFLNNYIQVNIG 366
            |:|.||||:||||||.||||||||.:|:|.||||||.:::|||:|::|..||.:.||..:::.:|
plant   545 LRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVETLARKVLNKPVEIQVG 609

  Fly   367 SLSLSANHNILQIVDVCDENEKLMKLIKLLTDISAENETKTIIFVETKKRVDEITRNISRQGWRA 431
            ..|: .|.:|.|:|::..|:|:..:|::||.:...:.  |.::||.:                  
plant   610 GRSV-VNKDITQLVEIRPESERFSRLLELLGEWYEKG--KVLVFVRS------------------ 653

  Fly   432 CAIHGDKSQQERDFVLSSFRNGRHSILVATDVAARGLDVDDVKFVINYDYPSNSEDYVHRIGRTG 496
                     ||:.  :|.|::...::|:||.||||||||.:::.|:|:|.|::.||||||:||||
plant   654 ---------QEKS--ISDFKSDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTG 707

  Fly   497 RSNNTGTAYTLFTHSNANKANDLIQVLREANQTINPKLMNMAMNGGYNKRGGGMGGGYRGGNGY- 560
            |:...|.|.|..:..:|..|.||::.|..:.|.:...:..:|                   .|: 
plant   708 RAGRKGCAVTFISEDDAKYAPDLVKALELSEQPVPDDVKAVA-------------------EGFM 753

  Fly   561 ----QGRNPQMGGGYNGGNNYRNNNGPGATMNRNSFNGGSAGGPPRFDQKPRTSPPNQGGQGGYR 621
                ||.....|.|| ||:.::.|.                    ..|:..:.:...|..:.|:.
plant   754 AKVKQGIEQAHGTGY-GGSGFKFNE--------------------EEDEVRKAAKKAQAKEYGFE 797

  Fly   622 GQ------------GGGGYQGQQQQQQQQNGGVPFSRFNPNAACFEP---NK--PQNG-----PG 664
            .:            ..||...|||....|...:      .:||...|   |:  |..|     ||
plant   798 EEKSDSEDENDVVRKAGGDISQQQITLAQIAAI------ASAASKAPVTANQLLPNGGGLATEPG 856

  Fly   665 SGPPQAQHQQQQQAQAAQQQHLLPDASVQAAMTAANYGVDQKRSRFSPYN 714
            ..|.....:......||..|..|  |.:||.....:|..:.:.:.| |.|
plant   857 IPPTDGAGRVAAMIAAANVQQYL--AKIQADAIPEHYEAELEINDF-PQN 903

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10077NP_648062.2 DEAD-like_helicase_N 49..544 CDD:475120 173/436 (40%)
AT3G09620NP_001327248.1 PTZ00121 <3..294 CDD:173412
DEADc_DDX46 386..607 CDD:350711 109/220 (50%)
SF2_C_DEAD 618..719 CDD:350174 44/131 (34%)
KH-I_AtRH42_like 887..989 CDD:411903 4/18 (22%)
Blue background indicates that the domain is not in the aligned region.

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