DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10077 and AT2G47330

DIOPT Version :10

Sequence 1:NP_648062.2 Gene:CG10077 / 38756 FlyBaseID:FBgn0035720 Length:818 Species:Drosophila melanogaster
Sequence 2:NP_566099.1 Gene:AT2G47330 / 819346 AraportID:AT2G47330 Length:760 Species:Arabidopsis thaliana


Alignment Length:648 Identity:233/648 - (35%)
Similarity:344/648 - (53%) Gaps:80/648 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 SEVNLTPFRKNFYKPCDSVLARTVGETETFLTSNEITIKGDQVPTPSIEFEEGGFPDYVMNEIRK 174
            |.::..|..|:||:..:|:...|..||..:.....|.:.|..|..|...||:.||...:|:.|:|
plant   181 SSIDYEPINKDFYEELESISGMTEQETTDYRQRLGIRVSGFDVHRPVKTFEDCGFSSQIMSAIKK 245

  Fly   175 QGFAKPTAIQAQGWPIAMSGRDLVGVAQTGSGKTLAYVLPAVVHINNQPRLERGDGPIALVLAPT 239
            |.:.||||||.|..||.:||||::|:|:||||||.|:|||.:|||.:||.|:|.:|||.::.|||
plant   246 QAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVHIMDQPELQRDEGPIGVICAPT 310

  Fly   240 RELAQQIQQVAIEFGSNTHVRNTCIFGGAPKGQQARDLERGVEIVIATPGRLIDFLERGTTSLKR 304
            ||||.||...|.:|.....:|.:.::||..|.:|.::|:.|.|||:||||||||.|:....::.|
plant   311 RELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKELKAGCEIVVATPGRLIDMLKMKALTMMR 375

  Fly   305 CTYLVLDEADRMLDMGFEPQIRKIMQQIRPDRQVLMWSATWPKEVRQLAEEFLNNYIQVNIGSLS 369
            .:||||||||||.|:|||||:|.|:.|||||||.|::|||.|.:|.:||.|.|::.|:|.:|.:.
plant   376 ASYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPWKVEKLAREILSDPIRVTVGEVG 440

  Fly   370 LSANHNILQIVDVC-DENEKLMKLIKLLTDISAENETKTIIFVETKKRVDEITRNISRQGWRACA 433
            : ||.:|.|:|:|. .:.|||..|::.|..:..|.:  .::|...|..||||...::...::..|
plant   441 M-ANEDITQVVNVIPSDAEKLPWLLEKLPGMIDEGD--VLVFASKKATVDEIEAQLTLNSFKVAA 502

  Fly   434 IHGDKSQQERDFVLSSFRNGRHSILVATDVAARGLDVDDVKFVINYDYPSNSEDYVHRIGRTGRS 498
            :||||.|..|...|..|::|.|.:|:||||||||||:..:|.|:|||...:.:.:|||||||||:
plant   503 LHGDKDQASRMETLQKFKSGVHHVLIATDVAARGLDIKSLKTVVNYDIAKDMDMHVHRIGRTGRA 567

  Fly   499 -NNTGTAYTLFTHSNANKANDLIQVLREANQTINPKLMNMAM-NGGYNKRGGGMGGGYRGGNGYQ 561
             :..|.||||.|...|..|.:|:..|..|.|.:.|:|.::|| :|.:..:..|..||.:|..|  
plant   568 GDRDGVAYTLVTQREARFAGELVNSLVAAGQNVPPELTDLAMKDGRFKSKRDGRKGGKKGRGG-- 630

  Fly   562 GRNPQMGGGYNGGNNYRNNNGPGATMNRNSFNGGSAGGPPRFDQKPRTSPPNQGGQGGYRGQGGG 626
                  |||..|........|.|       |:..|:..|     ..:.:|...|.....|     
plant   631 ------GGGNKGVRGVDFGLGIG-------FSSESSRTP-----SSKAAPSRSGAINSVR----- 672

  Fly   627 GYQGQQQQQQQQNGGVPFSRFNPNAACFEPNKPQNG--PGSGPPQAQHQQQQQAQAAQQQHLLPD 689
                         .|| .::|..:.....|:.|||.  |...|                      
plant   673 -------------TGV-MAQFKNSFVAATPSNPQNQAYPNKRP---------------------- 701

  Fly   690 ASVQAAMTAANYGVDQKRSRFSPYNMNFANMPP--PAMNQQQAAAAQQQQQQQLQTPQQQQQQ 750
             |:...::....|.|..|::        :..||  |..|.....::|...|.....|::::::
plant   702 -SLMGFVSGGTIGGDMGRTQ--------SQAPPVAPTQNASSHNSSQNHSQSSENRPRERKRR 755

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10077NP_648062.2 DEAD-like_helicase_N 49..544 CDD:475120 196/436 (45%)
AT2G47330NP_566099.1 SrmB 229..584 CDD:440279 172/357 (48%)

Return to query results.
Submit another query.