DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10077 and ddx43

DIOPT Version :10

Sequence 1:NP_648062.2 Gene:CG10077 / 38756 FlyBaseID:FBgn0035720 Length:818 Species:Drosophila melanogaster
Sequence 2:NP_001072473.1 Gene:ddx43 / 779928 XenbaseID:XB-GENE-988016 Length:666 Species:Xenopus tropicalis


Alignment Length:484 Identity:200/484 - (41%)
Similarity:284/484 - (58%) Gaps:31/484 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 GPGGPRNQDGFGGQNGGQRSSNHGAHL-PKIVWSEV-------------NLTPFRKNFYKPCDSV 128
            |||    ..||.......:|::....: |.|.|:.:             ::.|..|.|||....|
 Frog   164 GPG----FKGFRSSGSADKSADASFQVKPSINWASLRENKSKYEAMKWADMPPIAKAFYKESPEV 224

  Fly   129 LARTVGETETFLTSNEITIKGD------QVPTPSIEFEEG--GFPDYVMNEIRKQGFAKPTAIQA 185
            .:.:..|.|.:...|...|..|      .:|.|...||:.  .||: ||:.:.|.||.:||.||:
 Frog   225 ASMSRDEVEKWRKENNNIICDDLKEEKRSIPNPVPRFEDAFHPFPE-VMSALEKSGFERPTPIQS 288

  Fly   186 QGWPIAMSGRDLVGVAQTGSGKTLAYVLPAVVHINNQP-RLERGDGPIALVLAPTRELAQQIQQV 249
            |.||:.:.|.||:|:||||:||||||:||..:|::.|| ..|:.|||..||||||||||.|::..
 Frog   289 QAWPVILQGIDLIGIAQTGTGKTLAYLLPGFIHLDLQPIPREQQDGPGMLVLAPTRELALQVKAE 353

  Fly   250 AIEFGSNTHVRNTCIFGGAPKGQQARDLERGVEIVIATPGRLIDFLERGTTSLKRCTYLVLDEAD 314
            ..:: ......:.||:||..:..|...:.:||:|||||||||.|.......:||..|||||||||
 Frog   354 CSKY-KYKGFESICIYGGGDRNNQINKVTKGVDIVIATPGRLNDLQMNNFVNLKSITYLVLDEAD 417

  Fly   315 RMLDMGFEPQIRKIMQQIRPDRQVLMWSATWPKEVRQLAEEFLNNYIQVNIGSLSLSANHNILQI 379
            |||||||||||.||:..|||||..:|.|||||..||:||:.:|.:.:.|.:|:|.|:|.:.:.|.
 Frog   418 RMLDMGFEPQIMKILIDIRPDRHTIMTSATWPDGVRRLAKSYLKDPMMVYVGTLDLAAVNTVTQH 482

  Fly   380 VDVCDENEKLMKLIKLLTDISAENETKTIIFVETKKRVDEITRNISRQGWRACAIHGDKSQQERD 444
            |.|..|.||...::..:..:..::  |.|:||..|...|:::.:.|.||....::||::.|.:|:
 Frog   483 VLVIPEEEKRAFVLHFIDSLKPQD--KVIVFVGKKLVADDLSSDFSLQGIPVQSLHGNREQCDRE 545

  Fly   445 FVLSSFRNGRHSILVATDVAARGLDVDDVKFVINYDYPSNSEDYVHRIGRTGRSNNTGTAYTLFT 509
            ..|..|:.|:..||||||:|:|||||.||..|:|:|:|.|.|:||||:|||||:..||.:.||.|
 Frog   546 QALDDFKKGKVRILVATDLASRGLDVHDVTHVLNFDFPRNIEEYVHRVGRTGRAGRTGESITLVT 610

  Fly   510 HSNANKANDLIQVLREANQTINPKLMNMA 538
            ..:...|.:||.:|..|||.:...|.:||
 Frog   611 RKDWKVAGELISILERANQEVPGDLFDMA 639

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10077NP_648062.2 DEAD-like_helicase_N 49..544 CDD:475120 200/484 (41%)
ddx43NP_001072473.1 KH-I_DDX43_DDX53 95..160 CDD:411858
SrmB 269..661 CDD:440279 175/375 (47%)
Blue background indicates that the domain is not in the aligned region.

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