DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10077 and Ddx23

DIOPT Version :10

Sequence 1:NP_648062.2 Gene:CG10077 / 38756 FlyBaseID:FBgn0035720 Length:818 Species:Drosophila melanogaster
Sequence 2:NP_001074450.1 Gene:Ddx23 / 74351 MGIID:1921601 Length:819 Species:Mus musculus


Alignment Length:459 Identity:180/459 - (39%)
Similarity:257/459 - (55%) Gaps:49/459 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 WSEVNLTPFRKNFYKPCDSVLARTVGETETFLTSNEITIKGDQVPTPSIEFEEGGFPDYVMNEIR 173
            ||:           |..|.:..|   :...|.....||.||.::|.|...:::...|.:::..|.
Mouse   356 WSQ-----------KKLDEMTDR---DWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVID 406

  Fly   174 KQGFAKPTAIQAQGWPIAMSGRDLVGVAQTGSGKTLAYVLPAVVHINNQPRLER----GDGPIAL 234
            |.|:.:||.||.|..||.:..||::|||:||||||.|:::|.:|.|...|:::|    ..||.|:
Mouse   407 KCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAI 471

  Fly   235 VLAPTRELAQQIQQVAIEFGSNTHVRNTCIFGGAPKGQQARDLERGVEIVIATPGRLIDFLERGT 299
            :|||||||||||::..|:||....:|...:.||..:..|...|..|.||||||||||||.||...
Mouse   472 ILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRY 536

  Fly   300 TSLKRCTYLVLDEADRMLDMGFEPQIRKIMQQI-----RPD---------------------RQV 338
            ..|.||||:||||||||:||||||.::||::.:     :||                     ||.
Mouse   537 LVLSRCTYVVLDEADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQT 601

  Fly   339 LMWSATWPKEVRQLAEEFLNNYIQVNIGSLSLSANHNILQIVDVCDENEKLMKLIKLLTDISAEN 403
            :|::||.|..|.:||..:|.....|.|||.. ..:..:.|.|.:..|:||..||:.:|   ....
Mouse   602 VMFTATMPPAVERLARSYLRRPAVVYIGSAG-KPHERVEQKVFLMSESEKRKKLLAIL---EQGF 662

  Fly   404 ETKTIIFVETKKRVDEITRNISRQGWRACAIHGDKSQQERDFVLSSFRNGRHSILVATDVAARGL 468
            :...||||..||..|.:.:::.:.|:.||.:||.|.|::|:|.||:.:.|...||||||||.||:
Mouse   663 DPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGI 727

  Fly   469 DVDDVKFVINYDYPSNSEDYVHRIGRTGRSNNTGTAYTLFTHSNANKANDLIQVLREAN-QTINP 532
            |:.||..|:|||...|.|||:||||||||:..:|.|.|..|..::....:|.|.:.|:. .:..|
Mouse   728 DIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILESPVSSCPP 792

  Fly   533 KLMN 536
            :|.|
Mouse   793 ELAN 796

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10077NP_648062.2 DEAD-like_helicase_N 49..544 CDD:475120 180/459 (39%)
Ddx23NP_001074450.1 SF-CC1 79..>207 CDD:273721
SrmB 391..782 CDD:440279 164/394 (42%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.