DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10077 and Tdrd12

DIOPT Version :10

Sequence 1:NP_648062.2 Gene:CG10077 / 38756 FlyBaseID:FBgn0035720 Length:818 Species:Drosophila melanogaster
Sequence 2:NP_001355316.1 Gene:Tdrd12 / 71981 MGIID:1919231 Length:1277 Species:Mus musculus


Alignment Length:424 Identity:93/424 - (21%)
Similarity:175/424 - (41%) Gaps:59/424 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 PSIEFEEGGFPDYVMNEIRKQGFAKPTAIQAQGWPIAMSGRDLVGVAQTGSGKTLAYVLPAVVHI 219
            |.:..|:......:...:::..|..|:...:..||....|.|:|.::..|:...|  .||.::.|
Mouse   383 PCLTLEKSPLSADLKKALQRNKFPGPSHTASYSWPPIARGCDMVVISHCGNDPLL--YLPPLLTI 445

  Fly   220 NNQPRLERG---------DGPIALVLAPTRELAQQIQQVAIEFGSNTHVRNTCIFGGAPKGQQAR 275
                 |:.|         :||:|:::.|..:.||.|.::..::..::...:..:........:|:
Mouse   446 -----LQMGGCYKSLPSRNGPLAVIVCPGWKKAQFIFELLGDYSMSSRPLHPVLLTIGLHKDEAK 505

  Fly   276 D--LERGVEIVIATPGRLIDFLERGTTSLKRCTYLVLDEADRMLDMGFEPQIRKIMQQIRPD--- 335
            :  |.||.::::.||..|:..|...:....|..:|||||. .||......|:..|:...:.:   
Mouse   506 NMKLPRGCDVIVTTPHSLLRLLTYRSLLFLRLCHLVLDEV-HMLFFEANEQMFAILDNFKKNVEV 569

  Fly   336 -------RQVLMWSATWPKEVRQLAEEFLNNYIQVNIGSLSLSANH-NILQIVDVCDENEKLMKL 392
                   .|::.....|.|.:..|..||:.:...| |.:|..:|.: ::.|:|.:|.|.||...|
Mouse   570 EERESAPHQIVAVGVHWNKHIDHLVREFMKDPCVV-ITALEEAALYGSVQQVVHLCLECEKTSTL 633

  Fly   393 IKLLTDISAENETKTIIFVETKKRVDEITRNISRQGWRACAIHGDKSQQERDFVLSSFRN----- 452
            :::| |.......||:||..:....:.:.:.:...     :|...|..:|..|.|.|...     
Mouse   634 LQVL-DFVPSQAQKTLIFTCSVAETETVCKVVESN-----SIFCLKMHKEMAFNLKSILEQWKKK 692

  Fly   453 ---GRHSILVATDVAARGLDVDDVKFVINYDYPSNSE----------DYVHRIGRTGRSNNTGTA 504
               |.|.:|..||.....|.:.|...|:::.:||:.:          |:...:...|.....|..
Mouse   693 LSPGSHIVLTLTDDCIPLLAITDATCVVHFSFPSSPKVLGGRLYCMSDHFQSLTEQGSPAEQGDK 757

  Fly   505 YT----LFTHSNANKANDLIQVLREANQTINPKL 534
            .|    |.|..||:.|..:::.|..|:..|..:|
Mouse   758 KTKSVLLLTERNASHAVGILRYLERADAKIPSEL 791

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10077NP_648062.2 DEAD-like_helicase_N 49..544 CDD:475120 93/424 (22%)
Tdrd12NP_001355316.1 Tudor_TDRD12_rpt1 4..165 CDD:410505
DEAD-like_helicase_N 396..601 CDD:475120 45/212 (21%)
SrmB <507..810 CDD:440279 69/293 (24%)
Tudor_TDRD12_rpt2 863..985 CDD:410506
alpha-crystallin domain (ACD) found in alpha-crystallin-type small heat shock proteins, and a similar domain found in p23 (a cochaperone for Hsp90) and in other p23-like proteins. 1138..1242 CDD:469641
Blue background indicates that the domain is not in the aligned region.

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