DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10077 and Tdrd12

DIOPT Version :10

Sequence 1:NP_648062.2 Gene:CG10077 / 38756 FlyBaseID:FBgn0035720 Length:818 Species:Drosophila melanogaster
Sequence 2:XP_063134069.1 Gene:Tdrd12 / 689639 RGDID:1562792 Length:1333 Species:Rattus norvegicus


Alignment Length:412 Identity:94/412 - (22%)
Similarity:171/412 - (41%) Gaps:69/412 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   172 IRKQGFAKPTAIQAQGWPIAMSGRDLVGVAQTGSGKTLAYVLPAVVHINNQPRLERG-------- 228
            :::..|..|:...:..||....|.|:|.::..|:...|  .||.::.|     |:.|        
  Rat   456 LQRNKFPGPSHTASYSWPPIARGCDVVVISHCGNDPLL--YLPPLLTI-----LQMGGCYKSLPS 513

  Fly   229 -DGPIALVLAPTRELAQQIQQVAIEFGSNTHVRNTCIFGGAPKGQQARD--LERGVEIVIATPGR 290
             :||:|:::.|..:.||.|.::..::..::...:..:........:|::  |.||.::::.||..
  Rat   514 RNGPLAVIVCPGWKKAQFIFELLGDYSMSSRPLHPVLLTIGLHKDEAKNMKLPRGCDVIVTTPHS 578

  Fly   291 LIDFLERGTTSLKRCTYLVLDEAD-----------RMLDMGFEPQIRKIMQQIRPDRQVLMWSAT 344
            |:..|...:....|..:|||||..           .:|| .|:..:....::..| .|::.....
  Rat   579 LLRLLTYRSLLFLRLCHLVLDEVHVLFFEANEQMFAILD-NFKKNVEVEERESAP-HQIVAVGVH 641

  Fly   345 WPKEVRQLAEEFLNNYIQVNIGSLSLSANH-NILQIVDVCDENEKLMKLIKLLTDISAENETKTI 408
            |.:.:..|..||:.: ..|.|.:|..:|.: ::.|:|.:|.|.||...|:::| |.......||:
  Rat   642 WNRHIEHLVREFMKD-PHVVITALEEAALYGSVQQVVHLCLECEKTSTLLQVL-DFVPSQAQKTL 704

  Fly   409 IF----VETKKRVDEITRNISRQGWRACAIHGDKSQQERDFVLSS--------FRNGRHSILVAT 461
            ||    .||     ||...:.......|.    |..:|..|.|.|        ..:|.|.:|..|
  Rat   705 IFTCSVAET-----EIVCKVVESNSIFCL----KMHKEMAFNLKSILEQWKKKLSSGSHIVLTLT 760

  Fly   462 DVAARGLDVDDVKFVINYDYPSNSE----------DYVHRIGRTGRSNNTGTAYT----LFTHSN 512
            |.....|.:.|...|:::.:||:.:          |:...:...|.....|...|    |.|..|
  Rat   761 DDCIPLLAITDATCVVHFSFPSSPKVFGGRLYCMSDHFQSLTEQGSPAEQGGKKTKSVLLLTERN 825

  Fly   513 ANKANDLIQVLREANQTINPKL 534
            |:.|..:::.|..|:..|..:|
  Rat   826 ASHAVGVLRYLERADAKIPSEL 847

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10077NP_648062.2 DEAD-like_helicase_N 49..544 CDD:475120 94/412 (23%)
Tdrd12XP_063134069.1 None

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