DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10077 and Ddx55

DIOPT Version :9

Sequence 1:NP_001261491.1 Gene:CG10077 / 38756 FlyBaseID:FBgn0035720 Length:818 Species:Drosophila melanogaster
Sequence 2:NP_080685.2 Gene:Ddx55 / 67848 MGIID:1915098 Length:600 Species:Mus musculus


Alignment Length:412 Identity:132/412 - (32%)
Similarity:208/412 - (50%) Gaps:59/412 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   168 VMNEIRKQGFAKPTAIQAQGWPIAMSGRDLVGVAQTGSGKTLAYVLPAV-VHINNQPRLERGD-G 230
            |:..:|:.||...|.:|:...|:.|..:|:...|.||||||||:|:|.: :.:..:.:|::.. |
Mouse    20 VLGALRELGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPILEILLRREEKLKKNQVG 84

  Fly   231 PIALVLAPTRELAQQIQQVAIEFGSNTHVRNTCIF-GGAPKGQQARDLER----GVEIVIATPGR 290
              |:|:.||||||.||.:|...|..:....:..:: ||...|:   |:||    |..|::|||||
Mouse    85 --AIVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGE---DVERFKQHGGNIIVATPGR 144

  Fly   291 LIDFLERGTTSL------KRCTYLVLDEADRMLDMGFEPQIRKIMQQIRPDRQVLMWSATWPKEV 349
            |.|...|....|      |....||||||||:||||||..|..|::.:...|:..::|||..:||
Mouse   145 LEDMFRRKAEGLDLASCVKSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSATQTQEV 209

  Fly   350 RQLAEEFLNNYIQVNIGSLSLSA-----------NHNILQIVDVCDENEKLMKLIKLLTDISAEN 403
            ..|....|.|.:::::....::|           ||.:     :|..:||..:|:..|   .:..
Mouse   210 ENLVRAGLRNPVRISVKEKGVAASSTQKTPSRLENHYM-----ICKADEKFNQLVHFL---RSRQ 266

  Fly   404 ETKTIIFVET-------KKRVDEITRNISRQGWRACAIHGDKSQQERDFVLSSFRNGRHSILVAT 461
            :.|.::|..|       .|.::.:.:.:     :...||| |.:.:|:.:...||..:..|||.|
Mouse   267 QEKHLVFFSTCACVEYYGKALEALLKKV-----KILCIHG-KMKYKRNKIFMEFRKLQSGILVCT 325

  Fly   462 DVAARGLDVDDVKFVINYDYPSNSEDYVHRIGRTGRSNNTGTAYTLFTHSNANKANDL------- 519
            ||.|||:|:.:|.:|:.||.|||:..:|||.|||.|..:.|:|............|.|       
Mouse   326 DVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSALVFLLPMEEAYINFLAINQKCP 390

  Fly   520 IQVLREANQTIN--PKLMNMAM 539
            :|.:.....||:  |||..||:
Mouse   391 LQEMSLQRNTIDLLPKLRAMAL 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10077NP_001261491.1 PTZ00110 49..544 CDD:240273 132/412 (32%)
DEADc 159..364 CDD:238167 77/208 (37%)
HELICc 375..507 CDD:238034 42/138 (30%)
Ddx55NP_080685.2 DEADc 9..224 CDD:238167 77/208 (37%)
Q motif 9..37 5/16 (31%)
DEXDc 24..228 CDD:214692 76/208 (37%)
DEAD box 171..174 2/2 (100%)
Helicase_C 252..363 CDD:278689 39/119 (33%)
DUF4217 403..462 CDD:290667 5/10 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 499..551
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0331
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

Return to query results.
Submit another query.