DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10077 and ddx59

DIOPT Version :9

Sequence 1:NP_001261491.1 Gene:CG10077 / 38756 FlyBaseID:FBgn0035720 Length:818 Species:Drosophila melanogaster
Sequence 2:NP_001038443.2 Gene:ddx59 / 562123 ZFINID:ZDB-GENE-050208-665 Length:584 Species:Danio rerio


Alignment Length:452 Identity:147/452 - (32%)
Similarity:234/452 - (51%) Gaps:24/452 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 FGGQNGGQRSSNHGAHLPKIVWSEVNLTPFRKNF-YKPCDSVLARTVGETETFLTSNEITIKGDQ 151
            |..:|..:.|.|                  .||: ||....:...|..:.|.......|...|.:
Zfish   118 FNNKNTPESSEN------------------TKNYCYKEDTFISELTEEQIERVKAELGIVSVGTE 164

  Fly   152 VPTPSIEFEEGGFPDYVMNEIRKQGFAKPTAIQAQGWPIAMSGRDLVGVAQTGSGKTLAYVLPAV 216
            |..|.|||:...||..:...::..|:..||.:|.|..|:.::|||::..|.||||||:|::||.|
Zfish   165 VCRPVIEFQHCRFPTVLEKNLKVAGYEAPTPVQMQMVPVGLTGRDVIATADTGSGKTVAFLLPVV 229

  Fly   217 VHINNQPRLERGDGPIALVLAPTRELAQQIQQVAIEFGSN-THVRNTCIFGGAPKGQQARDLERG 280
            :.. .|........|..|:|.||||||.||::.|.|.... .::|...:.||.|...|...|:..
Zfish   230 MRA-LQSESASPSCPACLILTPTRELAIQIEEQAKELMRGLPNMRTALLVGGMPLPPQLHRLKHN 293

  Fly   281 VEIVIATPGRLIDFLERGTTSLKRCTYLVLDEADRMLDMGFEPQIRKIMQQIRPDRQVLMWSATW 345
            ::|||.|||||::.|::....|.....:|:||||.||.|||:.|:..|::|:..|.|.|:.|||.
Zfish   294 IKIVIGTPGRLLEILKQKAIQLDHVRTVVVDEADTMLKMGFQQQVLDILEQVPEDHQTLLTSATI 358

  Fly   346 PKEVRQLAEEFLNNYIQVNIGSLSLSANHNILQIVDVCDENEKLMKLIKLLTDISAENETKTIIF 410
            |...:||||...::.:.:.||..:... .|:.|||...:|..|..||.::|.| ....:...::|
Zfish   359 PTGTQQLAERLTHDPVTITIGQKNQPC-ANVRQIVLWVEEPSKKKKLFEILND-EKLYQPPVVVF 421

  Fly   411 VETKKRVDEITRNISR-QGWRACAIHGDKSQQERDFVLSSFRNGRHSILVATDVAARGLDVDDVK 474
            |:.|...|.:...:.: ......|||.||.|.||:.::.....|:..::::|.:..||||:.:||
Zfish   422 VDCKLGADLLCEAVQKVMSLNTVAIHSDKMQWERNKIVKGLLEGQFDVVISTGILGRGLDLVNVK 486

  Fly   475 FVINYDYPSNSEDYVHRIGRTGRSNNTGTAYTLFTHSNANKANDLIQVLREANQTINPKLMN 536
            .|||:|.|||.::|||:|||.||..:.|||.|...::|.....::::.::.....:.|:::|
Zfish   487 LVINFDMPSNMDEYVHQIGRAGRLGHRGTAITFMNNNNKRLFLEMVKRVKPTGSILPPQILN 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10077NP_001261491.1 PTZ00110 49..544 CDD:240273 147/452 (33%)
DEADc 159..364 CDD:238167 77/205 (38%)
HELICc 375..507 CDD:238034 48/132 (36%)
ddx59NP_001038443.2 PLN00206 60..562 CDD:215103 147/452 (33%)
zf-HIT 75..102 CDD:282314
DEADc 183..377 CDD:238167 74/194 (38%)
HELICc 387..519 CDD:238034 48/132 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0331
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.