DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10077 and ddx23

DIOPT Version :9

Sequence 1:NP_001261491.1 Gene:CG10077 / 38756 FlyBaseID:FBgn0035720 Length:818 Species:Drosophila melanogaster
Sequence 2:NP_001017213.2 Gene:ddx23 / 549967 XenbaseID:XB-GENE-986212 Length:806 Species:Xenopus tropicalis


Alignment Length:468 Identity:184/468 - (39%)
Similarity:258/468 - (55%) Gaps:49/468 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 EVNLTPFRKN-----------FYKPCDSVLARTVGETETFLTSNEITIKGDQVPTPSIEFEEGGF 164
            ||.|...||.           ..|..|.:..|   :...|.....||.||.::|.|...:.:...
 Frog   323 EVRLRKLRKKEAKQRWDDRHWSQKKLDEMTDR---DWRIFREDYSITTKGGKIPNPIRSWVDSSL 384

  Fly   165 PDYVMNEIRKQGFAKPTAIQAQGWPIAMSGRDLVGVAQTGSGKTLAYVLPAVVHINNQPRLER-- 227
            |.:::..|.|.|:.:||.||.|..||.:..||::|||:||||||.|:::|.:|.|...|:::|  
 Frog   385 PPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIE 449

  Fly   228 --GDGPIALVLAPTRELAQQIQQVAIEFGSNTHVRNTCIFGGAPKGQQARDLERGVEIVIATPGR 290
              ..||.|::|||||||||||::..|:||....:|...:.||..:..|...|..|.|||||||||
 Frog   450 ESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGR 514

  Fly   291 LIDFLERGTTSLKRCTYLVLDEADRMLDMGFEPQIRKIMQQI-----RPD--------------- 335
            |||.||.....|.||||:||||||||:||||||.::||::.:     :||               
 Frog   515 LIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEHMPVTNQKPDTDEAEDPEKMTANFE 579

  Fly   336 ------RQVLMWSATWPKEVRQLAEEFLNNYIQVNIGSLSLSANHNILQIVDVCDENEKLMKLIK 394
                  ||.:|::||.|..|.:||..:|.....|.|||.. ..:..:.|.|.:..|.||..||:.
 Frog   580 SGKHKYRQTVMFTATMPPAVERLARSYLRRPAVVYIGSAG-KPHERVEQKVFLMSEAEKRKKLLA 643

  Fly   395 LLTDISAENETKTIIFVETKKRVDEITRNISRQGWRACAIHGDKSQQERDFVLSSFRNGRHSILV 459
            :|   ....:...||||..||..|.:.:::.:.|:.||.:||.|.|::|:|.||:.:.|...|||
 Frog   644 IL---EKGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILV 705

  Fly   460 ATDVAARGLDVDDVKFVINYDYPSNSEDYVHRIGRTGRSNNTGTAYTLFTHSNANKANDLIQVLR 524
            |||||.||:|:.||..|:|||...|.|||:||||||||:..:|.|.|..|..:::...||.|.:.
 Frog   706 ATDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSSVFYDLKQAIL 770

  Fly   525 EAN-QTINPKLMN 536
            |:. .:..|:|.|
 Frog   771 ESPVSSCPPELAN 783

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10077NP_001261491.1 PTZ00110 49..544 CDD:240273 184/468 (39%)
DEADc 159..364 CDD:238167 98/234 (42%)
HELICc 375..507 CDD:238034 58/131 (44%)
ddx23NP_001017213.2 U2AF_lg 7..>99 CDD:273727
DEADc_DDX23 388..614 CDD:350703 97/225 (43%)
SF2_C_DEAD 625..754 CDD:350174 59/131 (45%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D183201at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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