DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10077 and Rs1

DIOPT Version :9

Sequence 1:NP_001261491.1 Gene:CG10077 / 38756 FlyBaseID:FBgn0035720 Length:818 Species:Drosophila melanogaster
Sequence 2:NP_001286188.1 Gene:Rs1 / 44087 FlyBaseID:FBgn0021995 Length:782 Species:Drosophila melanogaster


Alignment Length:516 Identity:151/516 - (29%)
Similarity:229/516 - (44%) Gaps:91/516 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   168 VMNEIRKQGFAKPTAIQAQGWPIAMSGRDLVGVAQTGSGKTLAYVLPAVVHINNQPRLERGDGPI 232
            :|..|...|:..||.|||...|:|:.|||:.|.|.||:|||.||:||.:..:..:|...:....:
  Fly   168 LMRAIGVLGYIYPTPIQASTIPVALLGRDICGCAATGTGKTAAYMLPTLERLLYRPLNNKAITRV 232

  Fly   233 ALVLAPTRELAQQIQQVAIEFGSNTHVRNTCIFGGAPKGQQARDLERGVEIVIATPGRLIDFLER 297
             |||.|||||..|:.||..:....|.:......||.....|...|.:..:|||||||||||.::.
  Fly   233 -LVLVPTRELGAQVYQVTKQLCQFTTIDVGLAIGGLDVKAQEAVLRQNPDIVIATPGRLIDHIKN 296

  Fly   298 GTT-SLKRCTYLVLDEADRMLDMGFEPQIRKIMQQIRPDRQVLMWSATWPKEVRQLAEEFLNNYI 361
            ..: :|.....|:|||||||||..|..|:::|:......||.:::|||..::|:.||...|:..|
  Fly   297 TPSFTLDSIEVLILDEADRMLDEYFAEQMKEIINSCCKTRQTMLFSATMSEQVKDLAAVSLDKPI 361

  Fly   362 QVNIGSLSLSANHNILQIVDVCDENEKLMKLIKLLTDISAENETKTIIFVETKKRVDEITRNISR 426
            :|.:.:....|.:...:.:.:.::.|...:.| |.:.|........::||:|||:...:...:..
  Fly   362 KVFVNNNQQVAFNLRQEFIRIREDKEGDREPI-LASLICRTFHDHCMVFVQTKKQAHRLHILLGL 425

  Fly   427 QGWRACAIHGDKSQQERDFVLSSFRNGRHSILVATDVAARGLDVDDVKFVINYDYPSNSEDYVHR 491
            .|.||..:||:.:||:|...|..|:..:..:|:||||||||||:..||.|||:..|..:|.|:||
  Fly   426 LGVRAGELHGNLTQQQRLESLKKFKEEQIDVLIATDVAARGLDIVGVKTVINFVMPITTEHYIHR 490

  Fly   492 IGRTGRSNNTGTAYTLFTHSNANKANDLIQVLREA--NQTINPKLMNMAMN-------------- 540
            :|||.|:...|.:.:|..........|:|:.....  |:.|.|:::....|              
  Fly   491 VGRTARAGRAGISVSLAGEKERKIVKDIIKNAESTIKNRIIPPEIIEKYRNKLTSLEPEIQNILD 555

  Fly   541 -----------------------GGYNKRGGGMGGGYRGGNGYQ----------------GRNPQ 566
                                   |..|:|.|          .:|                |...:
  Fly   556 EEQAERQLAKTEQQLSKTERKLLGQTNERRG----------WFQTKQQREAEKDRLALTTGDEDK 610

  Fly   567 MGGGYNGGNNYRNNNGPGAT---MNRNSFNGGSAGGPPRFD----------QKPRTSPPNQ 614
            ..||          .|.|.|   ..|..:.|....|||..|          ::||...|.|
  Fly   611 ASGG----------KGKGKTAGKRKRPEYGGDGEDGPPVKDLEAKRNKKKKEEPRKKTPEQ 661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10077NP_001261491.1 PTZ00110 49..544 CDD:240273 131/415 (32%)
DEADc 159..364 CDD:238167 76/196 (39%)
HELICc 375..507 CDD:238034 45/131 (34%)
Rs1NP_001286188.1 PTZ00424 148..537 CDD:185609 129/370 (35%)
DEADc 159..364 CDD:238167 76/196 (39%)
Helicase_C 393..498 CDD:278689 43/105 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451411
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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