DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10077 and pit

DIOPT Version :9

Sequence 1:NP_001261491.1 Gene:CG10077 / 38756 FlyBaseID:FBgn0035720 Length:818 Species:Drosophila melanogaster
Sequence 2:NP_001287459.1 Gene:pit / 42595 FlyBaseID:FBgn0266581 Length:680 Species:Drosophila melanogaster


Alignment Length:382 Identity:123/382 - (32%)
Similarity:204/382 - (53%) Gaps:26/382 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 EGGFPDYVMNEIRKQGFAKPTAIQAQGWPIAMSGRDLVGVAQTGSGKTLAYVLPAVVHINN---Q 222
            :|...:..:..|::.||.:.|.||::.....:.||||||.||||||||||:::|||..||.   .
  Fly   191 KGAVSEATLRAIKEMGFTEMTEIQSKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAVELINKLRFM 255

  Fly   223 PRLERGDGPIALVLAPTRELAQQIQQVAIEFGSNTHVRNTCIFGGAPKGQQARDLERGVEIVIAT 287
            ||    :|...::::|||||:.|...|..|..::.|.....:.||:.:..::..|.:|:.|::||
  Fly   256 PR----NGTGVIIISPTRELSMQTFGVLKELMAHHHHTYGLVMGGSNRQVESEKLGKGINILVAT 316

  Fly   288 PGRLIDFLERGTTSL-KRCTYLVLDEADRMLDMGFEPQIRKIMQQIRPDRQVLMWSATWPKEVRQ 351
            ||||:|.|:.....| |....|::||.||:|::|||.::::|:..:...||.:::|||....:..
  Fly   317 PGRLLDHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRRQTMLFSATQTARIEA 381

  Fly   352 LAEEFLNN---YIQVNIGSLSLSANHNILQIVDVCDENEKLMKLIKLLTDISAENETKTIIFVET 413
            |::..|.:   |:.|:....:.:.: .:.|...|| .:||  :|:.|.|.:....:.|.::|..:
  Fly   382 LSKLALKSEPIYVGVHDNQDTATVD-GLEQGYIVC-PSEK--RLLVLFTFLKKNRKKKVMVFFSS 442

  Fly   414 KKRV---DEITRNISRQGWRACAIHGDKSQQERDFVLSSFRNGRHSILVATDVAARGLDVDDVKF 475
            ...|   .|:...|...   ..:|||.:.|.:|......|.|....||:.|||||||||:..|.:
  Fly   443 CMSVKYHHELFNYIDLP---VTSIHGKQKQTKRTTTFFQFCNAESGILLCTDVAARGLDIPQVDW 504

  Fly   476 VINYDYPSNSEDYVHRIGRTGRSNNT-GTAYTLFTHSNANKANDLIQVLREANQTIN 531
            ::.||.|.:..:|:||:|||.|.:.| |.|..|.......    .::.|:.|...:|
  Fly   505 IVQYDPPDDPREYIHRVGRTARGSGTSGHALLLMRPEELG----FLRYLKAAKVPLN 557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10077NP_001261491.1 PTZ00110 49..544 CDD:240273 123/382 (32%)
DEADc 159..364 CDD:238167 73/209 (35%)
HELICc 375..507 CDD:238034 45/135 (33%)
pitNP_001287459.1 SrmB 186..677 CDD:223587 123/382 (32%)
DEADc 187..394 CDD:238167 72/206 (35%)
HELICc 408..537 CDD:238034 45/134 (34%)
DUF4217 569..627 CDD:290667
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451423
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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