DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10077 and Ddx1

DIOPT Version :9

Sequence 1:NP_001261491.1 Gene:CG10077 / 38756 FlyBaseID:FBgn0035720 Length:818 Species:Drosophila melanogaster
Sequence 2:NP_524212.2 Gene:Ddx1 / 40457 FlyBaseID:FBgn0015075 Length:727 Species:Drosophila melanogaster


Alignment Length:675 Identity:173/675 - (25%)
Similarity:262/675 - (38%) Gaps:170/675 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 GGGGAGGLAGGMV-PNRMG----GGAPGGGPGGAGMFQRNRSAPYPGFNGHGPANGGQRRMNGGG 74
            |..|.||..||.| |..|.    |.|....|.|.    |.:|..:..::|.....|    :.|.|
  Fly    74 GKAGKGGAIGGAVTPWTMSFFDRGNALAVTPDGL----RCQSREFKEWHGCRATTG----VRGKG 130

  Fly    75 ----------------------PSMGPGGPRNQDGFGGQNGGQRSSNHGAHLPKIVWSEVNLTPF 117
                                  .::..|..|...||||.  |::|:|.            ....:
  Fly   131 KFYFEATVTDEGLCRVGWSTQQANLDLGTCRMGFGFGGT--GKKSNNR------------QFDDY 181

  Fly   118 RKNFYKPCDSVLARTVG------ETETFLTSNEITIKGDQVPTPSIEFEEGGFPDYVMNEIRKQ- 175
            .:.|.|      |..:|      ..|...|.|...: |.....|....:|..:|..|:.....| 
  Fly   182 GEAFGK------ADVIGCLLDLKNQEVSFTKNGQNL-GVAFRLPDNLAKETFYPAVVLKNAEMQF 239

  Fly   176 GFAKPTAIQAQGWPIAMSGRDLVGVAQTGSGKTLAYVL--PAVVHINNQPRLERGDGPIALVLAP 238
            .|.|.....|       .|...||..|.|...:.|..:  ||....:.:|   ..:.|.|:::.|
  Fly   240 NFGKTDFKYA-------PGNGFVGACQAGPEHSKANPITGPAAGAPSAKP---APNAPQAIIMEP 294

  Fly   239 TRELAQQIQQVAIEFG---SNTHVRNTCIFGGAPKGQQARDLERGVEIVIATPGRLIDFLERGTT 300
            :||||:|......:|.   ||..||:..:.||....:|...|.:|..||:.|||||.:.:..|..
  Fly   295 SRELAEQTYNQIEKFKYHLSNPEVRSLLLIGGVRLEEQKAQLMQGTHIVVGTPGRLEEMINSGLV 359

  Fly   301 SLKRCTYLVLDEADRMLDMGFEPQIRKIMQQIRPD-------RQVLMWSATWPK-EVRQLAEEFL 357
            .|..|.:.||||||.:|..|:...|.::.:|| |.       .|:::.|||... ||:::||..:
  Fly   360 LLTHCRFFVLDEADALLKQGYTELIDRLHKQI-PKITSDGRRLQMVVCSATLHAFEVKKMAERLM 423

  Fly   358 N--NYIQVNIGSLSLSANHNILQIVD------------------VCDEN---------EKLMKLI 393
            :  .::.:..........|:::.:||                  |.|.:         |.|.:.:
  Fly   424 HFPTWVDLKGEDAVPETVHHVVCLVDPQMDTTWQSLRQPIGTDGVHDRDNVHPGNHSKETLSQAV 488

  Fly   394 KLLTD------ISAENETKTIIFVETKKRVDEITRNISRQGWR--AC-AIHGDKSQQERDFVLSS 449
            |||..      |...|..:.|||..||:..|.:.|.:.::|.:  :| .:|||:..|||...|..
  Fly   489 KLLKGEYCVHAIDKHNMDRAIIFCRTKQDCDNLERFLRQRGGKHYSCVCLHGDRKPQERKENLEM 553

  Fly   450 FRNGRHSILVATDVAARGLDVDDVKFVINYDYPSNSEDYVHRIGRTGRSNNTGTAYTLF------ 508
            |:..:...|:.|||||||||:..:.|:||...|.:..:|||||||.||:...|.|.:|.      
  Fly   554 FKRQQVKFLICTDVAARGLDITGLPFMINVTLPDDKTNYVHRIGRVGRAERMGLAISLVATVPEK 618

  Fly   509 ---------------THSNA----------NKANDLIQVLREANQTIN--PKLMNMAMNGGYNKR 546
                           .::|.          |:.|.|.:|....|.||.  .|.|::.:|      
  Fly   619 VWYHGEWCKSRGRSCNNTNLTEVRGCCIWYNEPNLLAEVEDHLNITIQQVDKTMDVPVN------ 677

  Fly   547 GGGMGGGYRGGNGYQGRNPQMGGGY 571
                  .:.|...|..:|.:.|.||
  Fly   678 ------DFDGKVVYGQKNLRTGSGY 696

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10077NP_001261491.1 PTZ00110 49..544 CDD:240273 153/607 (25%)
DEADc 159..364 CDD:238167 64/220 (29%)
HELICc 375..507 CDD:238034 53/167 (32%)
Ddx1NP_524212.2 P-loop_NTPase 4..>62 CDD:304359
SPRY_DDX1 91..242 CDD:293933 33/179 (18%)
SrmB 279..>612 CDD:223587 103/336 (31%)
P-loop_NTPase <280..426 CDD:304359 49/149 (33%)
Helicase_C 492..602 CDD:278689 41/109 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451420
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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