DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10077 and ddx5

DIOPT Version :9

Sequence 1:NP_001261491.1 Gene:CG10077 / 38756 FlyBaseID:FBgn0035720 Length:818 Species:Drosophila melanogaster
Sequence 2:NP_989229.1 Gene:ddx5 / 394837 XenbaseID:XB-GENE-1009995 Length:609 Species:Xenopus tropicalis


Alignment Length:657 Identity:351/657 - (53%)
Similarity:420/657 - (63%) Gaps:80/657 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 PGFNGHGPANGGQRRMNGGGPSMGPGGPRNQDGFGGQNGGQ--RSSNHGAHLPKIVWSEVNLTPF 117
            ||||....|     |..|.|     ||||    |||..||.  :..|.|..|.|..|:...|..|
 Frog     2 PGFNDRDRA-----RDRGFG-----GGPR----FGGNRGGTSGKYGNPGERLMKKKWNLDELPKF 52

  Fly   118 RKNFYKPCDSVLARTVGETETFLTSNEITIKGDQVPTPSIEFEEGGFPDYVMNEIRKQGFAKPTA 182
            .||||:....|:.||..|.:.:..|.|||::|...|.|.::|.|..||..:|..:::|.|..||.
 Frog    53 EKNFYQEHPDVVRRTPQECDQYRRSKEITVRGLNCPKPVLQFHEASFPANLMEVVKRQNFTDPTP 117

  Fly   183 IQAQGWPIAMSGRDLVGVAQTGSGKTLAYVLPAVVHINNQPRLERGDGPIALVLAPTRELAQQIQ 247
            ||.||||:|:||.|:||||.|||||||:|:||.:||||:||.|:||||||.||||||||||||:|
 Frog   118 IQGQGWPVALSGLDMVGVAMTGSGKTLSYLLPGIVHINHQPFLQRGDGPILLVLAPTRELAQQVQ 182

  Fly   248 QVAIEFGSNTHVRNTCIFGGAPKGQQARDLERGVEIVIATPGRLIDFLERGTTSLKRCTYLVLDE 312
            |||.|:|....:|:|||:||||||.|.|||||||||.||||||||||||.|.|:|.|||||||||
 Frog   183 QVAAEYGRACRLRSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLNRCTYLVLDE 247

  Fly   313 ADRMLDMGFEPQIRKIMQQIRPDRQVLMWSATWPKEVRQLAEEFLNNYIQVNIGSLSLSANHNIL 377
            ||||||||||||||||:.|||||||.||||||||||||||||:||.:|:.:|||:|.||||||||
 Frog   248 ADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYVHINIGALELSANHNIL 312

  Fly   378 QIVDVCDENEKLMKLIKLLTDISAENETKTIIFVETKKRVDEITRNISRQGWRACAIHGDKSQQE 442
            ||||||::.||..||::|:.:|.:|.|.|||:|||||:|.|::||.:.|.||.|..|||||||||
 Frog   313 QIVDVCNDGEKDEKLVRLMEEIMSEKENKTIVFVETKRRCDDLTRRLRRDGWPAMGIHGDKSQQE 377

  Fly   443 RDFVLSSFRNGRHSILVATDVAARGLDVDDVKFVINYDYPSNSEDYVHRIGRTGRSNNTGTAYTL 507
            ||:||:.|::|:..||:|||||:|||||:|||||||||||::||||:||||||.||:.||||||.
 Frog   378 RDWVLNEFKHGKSPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSSKTGTAYTF 442

  Fly   508 FTHSNANKANDLIQVLREANQTINPKLMNMAMN-------GGYNKRGGGMGGGYRGGNGYQGRNP 565
            ||..|..:.||||.|||||||.|||||:.:..:       ||.|.|......|.|||...:..:.
 Frog   443 FTPGNIKQVNDLISVLREANQAINPKLLQLVEDRGRFRGRGGMNDRRDRFSSGKRGGWDRENYDR 507

  Fly   566 QMGGGYNGGNNYRN------NNGPGA-TMNRNSFNGGSAGGPPRFDQKPRTSPPNQGGQGGYR-G 622
            ..||..:.||..:|      .||.|| ..|.||||  |.|               ...|.|:| |
 Frog   508 GFGGKRDFGNKSQNGFGNKSQNGFGAQNYNGNSFN--SYG---------------TNVQSGFRAG 555

  Fly   623 QGGGGYQGQQQQQQQQNGGVPFSRFNPNAACFEPNKPQNGPGSGPPQAQHQQQQQAQAAQQQHLL 687
            ...|.||.....|                        ||| .|.||       .|...|||.:..
 Frog   556 AQNGTYQNGYASQ------------------------QNG-YSAPP-------MQNSMAQQAYTY 588

  Fly   688 PDASVQA 694
            |.|:..|
 Frog   589 PAATATA 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10077NP_001261491.1 PTZ00110 49..544 CDD:240273 308/497 (62%)
DEADc 159..364 CDD:238167 150/204 (74%)
HELICc 375..507 CDD:238034 88/131 (67%)
ddx5NP_989229.1 DEADc 94..299 CDD:238167 150/204 (74%)
DEXDc 107..314 CDD:214692 157/206 (76%)
HELICc 310..442 CDD:238034 88/131 (67%)
P68HR 493..521 CDD:285323 8/27 (30%)
P68HR 545..576 CDD:285323 13/70 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 288 1.000 Domainoid score I1549
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H6797
Inparanoid 1 1.050 631 1.000 Inparanoid score I830
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000439
OrthoInspector 1 1.000 - - otm49090
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R290
SonicParanoid 1 1.000 - - X504
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.080

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