DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10077 and CG6418

DIOPT Version :10

Sequence 1:NP_648062.2 Gene:CG10077 / 38756 FlyBaseID:FBgn0035720 Length:818 Species:Drosophila melanogaster
Sequence 2:NP_648413.1 Gene:CG6418 / 39218 FlyBaseID:FBgn0036104 Length:791 Species:Drosophila melanogaster


Alignment Length:663 Identity:221/663 - (33%)
Similarity:326/663 - (49%) Gaps:139/663 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 LPKIVWSEVNLTPFRKNFYKPCDSV----------LARTVGETETFLTSNEITIKGDQVPTPSIE 158
            ||.|..||:...||.||||...|.:          |.||:|          :.:.|...|.|...
  Fly   216 LPPIYHSEIEYEPFEKNFYTQHDDIAALDDEQVRELRRTLG----------VKVTGPSPPKPVTS 270

  Fly   159 FEEGGFPDYVMNEIRKQGFAKPTAIQAQGWPIAMSGRDLVGVAQTGSGKTLAYVLPAVVHINNQP 223
            |...||.:.::..:||..:.:||.||||..|.|:||||::|:|:||||||.|::.|.::|:.:|.
  Fly   271 FGHFGFDEQLIKAVRKAEYTQPTPIQAQAVPTALSGRDIIGIAKTGSGKTAAFIWPMLMHVMDQK 335

  Fly   224 RLERGDGPIALVLAPTRELAQQIQQVAIEFGSNTHVRNTCIFGGAPKGQQARDLERGVEIVIATP 288
            :|:.|||||.|:|||||||:.||...|.:||...::...|.:||..|.:|::.||:|.||::|||
  Fly   336 QLKPGDGPIGLILAPTRELSLQIYNEAKKFGKVYNLNVVCCYGGGSKWEQSKALEQGAEIIVATP 400

  Fly   289 GRLIDFLERGTTSLKRCTYLVLDEADRMLDMGFEPQIRKIMQQIRPDRQVLMWSATWPKEVRQLA 353
            ||:||.::...|:|:|.|:|||||||||..||||||:|.|...:|||||.||:|||:.|.:.:||
  Fly   401 GRMIDMVKMKATNLRRVTFLVLDEADRMFHMGFEPQVRSICNHVRPDRQCLMFSATFKKRIERLA 465

  Fly   354 EEFLNNYIQVNIGSLSLSANHNILQIVDVCDE-----NEKLMKLIKLLTDISAENETKTIIFVET 413
            .:.|::.:::..|.|: .||.:|.|.|.|...     |..|..|:|.|      :|...:|||..
  Fly   466 RDVLSDPVRIVQGDLN-EANQDITQSVYVFPNPLQKWNWLLCHLVKFL------SEGSVLIFVTK 523

  Fly   414 KKRVDEITRNISRQGWRACAIHGDKSQQERDFVLSSFRNGRHSILVATDVAARGLDVDDVKFVIN 478
            |...:.::.|:..:.:....:|||..|.:|:.|::.|:.....|||||||||||||:..::.|:|
  Fly   524 KVDAETVSNNLLIKEYNCLLLHGDMDQADRNKVITQFKRKECDILVATDVAARGLDIPHIRNVVN 588

  Fly   479 YDYPSNSEDYVHRIGRTGRSNNTGTAYTLFTHSNANKANDLIQVLREANQTINPKLMNMAMNGGY 543
            ||...:.|.:.||||||||:...|.||||.|..:...|..|::.|..|:|.:...||.:||...:
  Fly   589 YDTARDIETHTHRIGRTGRAGEKGNAYTLVTDKDKEFAGHLVRNLEGADQLVPDDLMELAMKSSW 653

  Fly   544 NKRGGGMGGGYRGGNGYQGRNPQMGGGYNGGNNYRNNNGPGATMNRNSFNGGSAGGPPRFDQKPR 608
            .:     ...::.|.|.:..|...|.||                 |...|||             
  Fly   654 FR-----SSRFKQGKGKRPTNTHTGLGY-----------------REKGNGG------------- 683

  Fly   609 TSPPNQGGQGGYRGQGGGGYQGQQQQQQQQNGGVPFSRFNPNAACFEPNKPQNGP------GSGP 667
                     |||...||                      :.:.|....:.|.:||      .|||
  Fly   684 ---------GGYGSAGG----------------------SESTASVSAHSPSDGPSSKAFSSSGP 717

  Fly   668 PQAQHQQQQQAQAAQQ------------QHLLPDASVQAAMTAANYGVDQKRSRFSPYNMNFANM 720
            ...::...::|..:|.            :..||::.|.|                       |.|
  Fly   718 ATDRYTAMREAFRSQYNNQFRASSDRTWEKTLPESGVFA-----------------------APM 759

  Fly   721 PPPAMNQQQAAAA 733
            .||:.:.|.|:|:
  Fly   760 APPSSSTQGASAS 772

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10077NP_648062.2 DEAD-like_helicase_N 49..544 CDD:475120 186/454 (41%)
CG6418NP_648413.1 SrmB 269..634 CDD:440279 160/371 (43%)

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