DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10077 and Ddx3y

DIOPT Version :9

Sequence 1:NP_001261491.1 Gene:CG10077 / 38756 FlyBaseID:FBgn0035720 Length:818 Species:Drosophila melanogaster
Sequence 2:NP_001102328.1 Gene:Ddx3y / 364073 RGDID:1309586 Length:659 Species:Rattus norvegicus


Alignment Length:623 Identity:232/623 - (37%)
Similarity:312/623 - (50%) Gaps:102/623 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 GPGGAGMFQRNRSAPYPGFNGHGPANGGQRRMNGG-------------GPSMGPGGPRNQDGFGG 90
            |.|..|.|.....:.|.|....|..:|..:...||             ...:.|.....|:.|.|
  Rat    87 GSGSRGRFDDRGRSDYEGVGSRGGRSGFGKFERGGNSRWCDKADEDDWSKPLPPSERLEQELFSG 151

  Fly    91 QNGGQRSSNHGAHLPKIVWSEVNLTPFRKNFYKPCDSVLARTVGETETFLTSNEITIKGDQVPTP 155
            .|.|                        .||.|..|..:..|                |:..| |
  Rat   152 GNTG------------------------INFEKYDDIPVEAT----------------GNNCP-P 175

  Fly   156 SIE-FEEGGFPDYVMNEIRKQGFAKPTAIQAQGWPIAMSGRDLVGVAQTGSGKTLAYVLPAVVHI 219
            .|| |.:....:.:|..|....:.:||.:|....||....|||:..||||||||.|::||.:..|
  Rat   176 HIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQI 240

  Fly   220 -------------NNQPRLERGDGPIALVLAPTRELAQQIQQVAIEFGSNTHVRNTCIFGGAPKG 271
                         .|.....|...||:||||||||||.||.:.|.:|...:.||...::|||..|
  Rat   241 YTDGPGEALRAMKENGKYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIG 305

  Fly   272 QQARDLERGVEIVIATPGRLIDFLERGTTSLKRCTYLVLDEADRMLDMGFEPQIRKIMQQ--IRP 334
            ||.||||||..:::||||||:|.:|||...|..|.||||||||||||||||||||:|::|  :.|
  Rat   306 QQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPP 370

  Fly   335 D--RQVLMWSATWPKEVRQLAEEFLNNYIQVNIGSLSLSANHNILQIVDVCDENEKLMKLIKLLT 397
            .  |..:|:|||:|||::.||.:||:.||.:.:|.:. |.:.||.|.|...:|.:|...|:.||.
  Rat   371 KGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVG-STSENITQKVVWVEEADKRSFLLDLLN 434

  Fly   398 DISAENETKTIIFVETKKRVDEITRNISRQGWRACAIHGDKSQQERDFVLSSFRNGRHSILVATD 462
              :...::..::||||||..|.:...:..:|:...:||||:||::|:..|..||:|:..|||||.
  Rat   435 --ATGKDSLILVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATA 497

  Fly   463 VAARGLDVDDVKFVINYDYPSNSEDYVHRIGRTGRSNNTGTAYTLFTHSNANKANDLIQVLREAN 527
            |||||||:.:||.|||:|.||:.|:||||||||||..|.|.|.:.|...|.|...||:.:|.||.
  Rat   498 VAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAK 562

  Fly   528 QTINPKLMNMAMNGGYNKRGGGMGGGYRGGNGYQGRNPQMGGGYNGGNNYRNNNGPGATMNRNSF 592
            |.:...|.|||....|.       ||.||.:     ..:..||: |..:||.::|..:    :||
  Rat   563 QEVPSWLENMAFEHHYK-------GGSRGRS-----KSRFSGGF-GARDYRQSSGASS----SSF 610

  Fly   593 NGGSAGGPPRFDQKPRTSPPNQGGQGGYRGQGGGGYQG 630
            :.|.|.          .|....|..|..||.|||.|.|
  Rat   611 SSGRAS----------NSRSGGGSHGSSRGFGGGSYGG 638

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10077NP_001261491.1 PTZ00110 49..544 CDD:240273 203/525 (39%)
DEADc 159..364 CDD:238167 104/221 (47%)
HELICc 375..507 CDD:238034 62/131 (47%)
Ddx3yNP_001102328.1 eIF-4B 82..>170 CDD:283846 21/122 (17%)
DEADc 180..402 CDD:238167 104/221 (47%)
DEXDc 193..416 CDD:214692 106/223 (48%)
Helicase_C 424..534 CDD:278689 54/111 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53695
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
43.880

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