DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10077 and ddx23

DIOPT Version :9

Sequence 1:NP_001261491.1 Gene:CG10077 / 38756 FlyBaseID:FBgn0035720 Length:818 Species:Drosophila melanogaster
Sequence 2:NP_956176.1 Gene:ddx23 / 334283 ZFINID:ZDB-GENE-030131-6215 Length:807 Species:Danio rerio


Alignment Length:459 Identity:185/459 - (40%)
Similarity:259/459 - (56%) Gaps:49/459 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 WSEVNLTPFRKNFYKPCDSVLARTVGETETFLTSNEITIKGDQVPTPSIEFEEGGFPDYVMNEIR 173
            ||:           |..|.:..|   :...|.....||.||.::|.|...::|...|.:::..|.
Zfish   344 WSQ-----------KKLDEMTDR---DWRIFREDYSITTKGGKIPNPIRNWKEYSLPPHILEVIE 394

  Fly   174 KQGFAKPTAIQAQGWPIAMSGRDLVGVAQTGSGKTLAYVLPAVVHINNQPRLER----GDGPIAL 234
            |.|:..||.||.|..||.:..||::|||:||||||.|:::|.:|.|...|:::|    ..||.|:
Zfish   395 KCGYKDPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEDSDQGPYAI 459

  Fly   235 VLAPTRELAQQIQQVAIEFGSNTHVRNTCIFGGAPKGQQARDLERGVEIVIATPGRLIDFLERGT 299
            :|||||||||||::..|:||....:|...:.||..:..|...|..|.||||||||||||.||...
Zfish   460 ILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRY 524

  Fly   300 TSLKRCTYLVLDEADRMLDMGFEPQIRKIMQQI-----RPD---------------------RQV 338
            ..|.||||:||||||||:||||||.::||::.|     :||                     ||.
Zfish   525 LVLSRCTYVVLDEADRMIDMGFEPDVQKILEYIPVTNQKPDTDDAEDPEKMMQNFESGKHKYRQT 589

  Fly   339 LMWSATWPKEVRQLAEEFLNNYIQVNIGSLSLSANHNILQIVDVCDENEKLMKLIKLLTDISAEN 403
            :|::||.|..|.:||..:|.....|.|||.. ..:..:.|.|.:..|.||..||:::|   ::..
Zfish   590 VMFTATMPPAVERLARSYLRRPAVVYIGSAG-KPHERVEQKVILMSEGEKRKKLLEVL---ASGF 650

  Fly   404 ETKTIIFVETKKRVDEITRNISRQGWRACAIHGDKSQQERDFVLSSFRNGRHSILVATDVAARGL 468
            |...||||..||..|.:.:::.:.|:.||.:||.|.|::|:|.||:.:.|...||||||||.||:
Zfish   651 EPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGI 715

  Fly   469 DVDDVKFVINYDYPSNSEDYVHRIGRTGRSNNTGTAYTLFTHSNANKANDLIQVLREAN-QTINP 532
            |:.||..|:|||...|.|||:||||||||:..:|.|.|..|..:::...||.|.:.|:. .|..|
Zfish   716 DIQDVSMVLNYDMAKNIEDYIHRIGRTGRAGKSGVAMTFLTKEDSSVFYDLKQAILESPVSTCPP 780

  Fly   533 KLMN 536
            :|.|
Zfish   781 ELAN 784

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10077NP_001261491.1 PTZ00110 49..544 CDD:240273 185/459 (40%)
DEADc 159..364 CDD:238167 100/234 (43%)
HELICc 375..507 CDD:238034 59/131 (45%)
ddx23NP_956176.1 DEADc 380..616 CDD:238167 101/235 (43%)
DEXDc 393..629 CDD:214692 102/236 (43%)
Helicase_C 637..746 CDD:278689 54/111 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D183201at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.