DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10077 and Hlc

DIOPT Version :9

Sequence 1:NP_001261491.1 Gene:CG10077 / 38756 FlyBaseID:FBgn0035720 Length:818 Species:Drosophila melanogaster
Sequence 2:NP_001285517.1 Gene:Hlc / 33118 FlyBaseID:FBgn0001565 Length:560 Species:Drosophila melanogaster


Alignment Length:411 Identity:117/411 - (28%)
Similarity:195/411 - (47%) Gaps:54/411 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 QVPTPSIEFEEGGFPDYVMNEIRKQGFAKPTAIQAQGWPIAMSGRDLVGVAQTGSGKTLAYVLPA 215
            |:...:::|.|......::..:.:.|:.:||.||:...|:.:.|:|:|..|:||||||..|.||.
  Fly     3 QMTQKTVQFHELELDQRILKAVAQLGWQQPTLIQSTAIPLLLEGKDVVVRARTGSGKTATYALPL 67

  Fly   216 VVHINNQPRLERGDGPI-ALVLAPTRELAQQ----IQQVAIEFGSNTHV------RNTCIFGGAP 269
            :..|.|. :|...:..: |:|||||:||.:|    |:|:....|....|      .|..:     
  Fly    68 IQKILNS-KLNASEQYVSAVVLAPTKELCRQSRKVIEQLVESCGKVVRVADIADSSNDTV----- 126

  Fly   270 KGQQARDLERGVEIVIATPGRLIDFLERGT-TSLKRCTYLVLDEADRMLDMGFEPQIRKIMQQIR 333
              .|...|....:||:|||..|:.:.|.|: ..||....||:||||.:...|:|...:::::.:.
  Fly   127 --TQRHALSESPDIVVATPANLLAYAEAGSVVDLKHVETLVVDEADLVFAYGYEKDFKRLIKHLP 189

  Fly   334 PDRQVLMWSATWPKEVRQLAEEFLNNYIQVNIGSLSLSANHNILQIVDVCDENEK---LMKLIKL 395
            |..|.::.|||...:|.::....|||.:.:.:....|.....:.....:.:||:|   |..|:||
  Fly   190 PIYQAVLVSATLTDDVVRMKGLCLNNPVTLKLEEPELVPQDQLSHQRILAEENDKPAILYALLKL 254

  Fly   396 LTDISAENETKTIIFVETKKRVDEITRNISRQGWRACAIHGDKSQQERDFVLSSFRNGRHSILVA 460
            ..     ...|:||||.:..|..::...:.:.|.|||.::.:.....|...:|.|..|.:.|::|
  Fly   255 RL-----IRGKSIIFVNSIDRCYKVRLFLEQFGIRACVLNSELPANIRIHTISQFNKGTYDIIIA 314

  Fly   461 TD-------------------------VAARGLDVDDVKFVINYDYPSNSEDYVHRIGRTGRSNN 500
            :|                         .|:||:|...|..|||:|:|.:...|:||.|||.|.||
  Fly   315 SDEHHMEKPGGKSATNRKSPRSGDMESSASRGIDFQCVNNVINFDFPRDVTSYIHRAGRTARGNN 379

  Fly   501 TGTAYTLFTHSNANKANDLIQ 521
            .|:..: |.....:|.||.::
  Fly   380 KGSVLS-FVSMKESKVNDSVE 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10077NP_001261491.1 PTZ00110 49..544 CDD:240273 117/411 (28%)
DEADc 159..364 CDD:238167 67/216 (31%)
HELICc 375..507 CDD:238034 44/159 (28%)
HlcNP_001285517.1 P-loop_NTPase 11..220 CDD:304359 67/216 (31%)
DEXDc 24..231 CDD:214692 66/214 (31%)
HELICc 234..386 CDD:238034 44/157 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451419
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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