DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10077 and Ddx21

DIOPT Version :10

Sequence 1:NP_648062.2 Gene:CG10077 / 38756 FlyBaseID:FBgn0035720 Length:818 Species:Drosophila melanogaster
Sequence 2:NP_001032278.1 Gene:Ddx21 / 317399 RGDID:1307306 Length:782 Species:Rattus norvegicus


Alignment Length:661 Identity:179/661 - (27%)
Similarity:282/661 - (42%) Gaps:180/661 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 KPCDSVLARTVGETETFLTSNEITIKGDQVPTPSIEFEEGGFPDYVMNE-----IRKQGFAKPTA 182
            || ||...:..||...  |..||          .:|.:||.|.::.::|     ::.:|......
  Rat   156 KP-DSSSTQAPGEESE--TEKEI----------PVEQKEGAFSNFPISEETVKLLKARGVNFLFP 207

  Fly   183 IQAQGWPIAMSGRDLVGVAQTGSGKTLAYVLPAVVHINN--QPRLERGDGPIALVLAPTRELAQQ 245
            |||:.:....||:||:..|:||:|||.::.:|.:..:..  |.| :||..|..||||||||||.|
  Rat   208 IQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPLIEKLQGGLQER-KRGRAPQVLVLAPTRELANQ 271

  Fly   246 IQQVAIEFGSNT-HVRNTCIFGGAPKGQQARDLERGVEIVIATPGRLIDFLERGTTSLKRCTYLV 309
            :.:   :|...| .:...|.:||.|.|.|...:..|::|::.||||:.|.|:.|...|.:..::|
  Rat   272 VSK---DFSDITKKLSVACFYGGTPYGGQIERMRSGIDILVGTPGRIKDHLQNGKLDLTKLKHVV 333

  Fly   310 LDEADRMLDMGFEPQIRKIM-----QQIRPDRQVLMWSATWPKEVRQLAEEFL-NNYIQVN-IGS 367
            |||.|:||||||..|:.:|:     :....:.|.|::|||.|..|..:|:::: :.|.||: ||.
  Rat   334 LDEVDQMLDMGFADQVEEILCVAYKKDSEDNPQTLLFSATCPHWVFNVAKKYMKSTYEQVDLIGK 398

  Fly   368 LSLSANHNILQIVDVCDENEKLMKLIKLLTDISAENETKTIIFVETKKRVDEITRNIS-RQGWRA 431
            .:..|...:..:...|...|: ..:|..:..:.:.::.:||||.||||...|:::|.. :|.  |
  Rat   399 KTQKAAITVEHLAIKCHWTER-AAVIGDVIRVYSGHQGRTIIFCETKKDAQELSQNTCIKQD--A 460

  Fly   432 CAIHGDKSQQERDFVLSSFRNGRHSILVATDVAARGLDVDDVKFVINYDYPSNSEDYVHRIGRTG 496
            .::|||..|::|:..|..||||...:||||:|||||||:.:|..|:....|.:.|.|:||.||||
  Rat   461 QSLHGDIPQKQREITLKGFRNGNFGVLVATNVAARGLDIPEVDLVVQSCPPKDVESYIHRSGRTG 525

  Fly   497 RSNNTGTAYTLFTHSNANK---------------------------ANDLIQVL----------- 523
            |:..||.....:.|....:                           :.|.|::|           
  Rat   526 RAGRTGVCICFYQHKEEYQLAQVEQKAGIKFKRIGVPSATEIIKASSKDAIRLLDSVPPTAIGHF 590

  Fly   524 -REANQTINPK-----------------------LMNMAM--------------NGGY------N 544
             :.|.:.|..|                       |:|...              |..|      .
  Rat   591 KQSAEKLIEEKGAVEALAAALAHISGATSVDQRSLINSQAGFVTMILRCSVEMPNISYAWKELKE 655

  Fly   545 KRGGGMGGGYRGGNGYQGR--------------------------------NPQMGG---GYNGG 574
            :.|..:....:|....:|:                                .|::.|   ||.||
  Rat   656 QLGESIDAKVKGMVFLKGKLGVCFDVRTEAVTEIKEKWHDSRRWQLTVATEQPELEGPPEGYRGG 720

  Fly   575 NNYRNNNGPGATMNRNSFNGGSAGGPPRFDQKPRTSPPNQGGQGGYRGQGGGGYQGQQQQQQQQN 639
            ...|:.       :|.||.|                  .:||...:||||..|  |.:..:.|:.
  Rat   721 RGQRDG-------SRGSFRG------------------QRGGSRNFRGQGQRG--GSRNFRGQRP 758

  Fly   640 GGVPFSRFNPN 650
            ||...|..:||
  Rat   759 GGGNKSNRSPN 769

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10077NP_648062.2 DEAD-like_helicase_N 49..544 CDD:475120 151/518 (29%)
Ddx21NP_001032278.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..184 12/40 (30%)
Q motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU00552 182..210 5/27 (19%)
SrmB 184..570 CDD:440279 129/392 (33%)
DEAD box. /evidence=ECO:0000255|PROSITE-ProRule:PRU00541 335..338 2/2 (100%)
GUCT_RHII_Gualpha_beta 613..705 CDD:240593 7/91 (8%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 704..782 25/93 (27%)
AdoMet_MTases 716..>765 CDD:473071 20/75 (27%)
3 X 5 AA repeats 720..747 12/51 (24%)

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