DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10077 and Ddx17

DIOPT Version :9

Sequence 1:NP_001261491.1 Gene:CG10077 / 38756 FlyBaseID:FBgn0035720 Length:818 Species:Drosophila melanogaster
Sequence 2:NP_001359065.1 Gene:Ddx17 / 315133 RGDID:1304945 Length:652 Species:Rattus norvegicus


Alignment Length:781 Identity:364/781 - (46%)
Similarity:433/781 - (55%) Gaps:170/781 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 MNGGGPSMGPGGPRNQD----GFGGQNGG----QRSSNHGAHLPKIVWSEVNLTPFRKNFYKPCD 126
            |.|||     .|.|::|    |||.:.|.    ::..|.|..|.|..|....|..|.||||....
  Rat     1 MRGGG-----FGDRDRDRDRGGFGARGGSGLPPKKFGNPGERLRKKKWDLSELPKFEKNFYVEHP 60

  Fly   127 SVLARTVGETETFLTSNEITIK-GDQVPTPSIEFEEGGFPDYVMNEIRKQGFAKPTAIQAQGWPI 190
            .|...|..|.:......|||:: ||..|.|...|....||.|||:.:..|.|.:||.||.||:|:
  Rat    61 EVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPL 125

  Fly   191 AMSGRDLVGVAQTGSGKTLAYVLPAVVHINNQPRLERGDGPIALVLAPTRELAQQIQQVAIEFGS 255
            |:||||:||:|||||||||||:|||:||||:||.||||||||.||||||||||||:||||.::|.
  Rat   126 ALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQQVADDYGK 190

  Fly   256 NTHVRNTCIFGGAPKGQQARDLERGVEIVIATPGRLIDFLERGTTSLKRCTYLVLDEADRMLDMG 320
            .:.:::|||:||||||.|.|||||||||.||||||||||||.|.|:|:|||||||||||||||||
  Rat   191 CSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMG 255

  Fly   321 FEPQIRKIMQQIRPDRQVLMWSATWPKEVRQLAEEFLNNYIQVNIGSLSLSANHNILQIVDVCDE 385
            ||||||||:.|||||||.||||||||||||||||:||.:|.|:|:|:|.||||||||||||||.|
  Rat   256 FEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCME 320

  Fly   386 NEKLMKLIKLLTDISAENETKTIIFVETKKRVDEITRNISRQGWRACAIHGDKSQQERDFVLSSF 450
            :||..|||:|:.:|.||.|.|||||||||:|.|::||.:.|.||.|..|||||||.|||:||:.|
  Rat   321 SEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEF 385

  Fly   451 RNGRHSILVATDVAARGLDVDDVKFVINYDYPSNSEDYVHRIGRTGRSNNTGTAYTLFTHSNANK 515
            |:|:..||:|||||:|||||:|||||||||||::|||||||||||.||.|.|||||.||..|..:
  Rat   386 RSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQ 450

  Fly   516 ANDLIQVLREANQTINPKLMNMAMNGGYNKRGGGMGGGYRGGNGYQ----GRNPQM--------- 567
            |.:||:||.||||.||||||.:.     :.||||.|||..|.:.|:    ..||.:         
  Rat   451 ARELIKVLEEANQAINPKLMQLV-----DHRGGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRR 510

  Fly   568 -----GGGYNGGNNYRNNNGPGATMNRNSFNGGSAGGPPRFDQKPRTSPPNQGGQGGYRGQGGGG 627
                 .||.....:||:.:                       :..|.|..|           |.|
  Rat   511 LRGVKDGGRRDSTSYRDRS-----------------------ETDRASYAN-----------GSG 541

  Fly   628 YQGQQQQQQQQNGGVPFSRFNPNAACFEPNKPQNGPGSGPPQAQHQQQQQAQAAQQQHLLPDASV 692
            |            |.|.|.|.                             |||.|..:      .
  Rat   542 Y------------GSPNSAFG-----------------------------AQAGQYTY------A 559

  Fly   693 QAAMTAANYGVDQKRSRFSPYN-MNFANMPPPAMNQQQAAAAQQQQQQQL-------QTPQQQQQ 749
            |....||.||.       |.|. ..:|.....|.:......:.|...||.       |.||....
  Rat   560 QGTYGAAAYGT-------SGYTAQEYAAGTYGASSTTSTGRSSQSSSQQFSGIGRSGQQPQPLMS 617

  Fly   750 QQQMQQPQAYGQYSSMSSSMATVSLNGGAAAVASSYRAPYAVPTQAAPYMMANGGDIFAYPPPPL 814
            ||..|.|.|                                  |....||   |...:.|||||.
  Rat   618 QQFAQPPGA----------------------------------TNMIGYM---GQTAYQYPPPPP 645

  Fly   815 P 815
            |
  Rat   646 P 646

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10077NP_001261491.1 PTZ00110 49..544 CDD:240273 305/482 (63%)
DEADc 159..364 CDD:238167 153/204 (75%)
HELICc 375..507 CDD:238034 93/131 (71%)
Ddx17NP_001359065.1 PTZ00110 32..502 CDD:240273 305/474 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166353878
Domainoid 1 1.000 287 1.000 Domainoid score I1518
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 616 1.000 Inparanoid score I857
OMA 1 1.010 - - QHG53695
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000439
OrthoInspector 1 1.000 - - otm46006
orthoMCL 1 0.900 - - OOG6_100364
Panther 1 1.100 - - O PTHR47958
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X504
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.900

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