DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10077 and ddx4

DIOPT Version :10

Sequence 1:NP_648062.2 Gene:CG10077 / 38756 FlyBaseID:FBgn0035720 Length:818 Species:Drosophila melanogaster
Sequence 2:XP_073769595.1 Gene:ddx4 / 30263 ZFINID:ZDB-GENE-990415-272 Length:796 Species:Danio rerio


Alignment Length:613 Identity:218/613 - (35%)
Similarity:311/613 - (50%) Gaps:96/613 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 NMYNGQMNAFGGG--GGGGAGGLAGGMVPNRMGGGAPGGG--PGGAGMFQRNRSAPYPGFNGHGP 62
            |..||..:.:.||  .|.|.||..||.    .||...||.  .|..|..:.|.........|.|.
Zfish   197 NDENGNDDGWKGGESRGRGRGGFGGGF----RGGFRDGGNEDTGRRGFGRENNENGNDEGEGRGR 257

  Fly    63 ANGGQRR--MNGGGPSMGPGGPRNQDGFGGQN-------------GGQRSSNHGAHLPKIVW--- 109
            ..||.|.  .:|||...|..| ..:.||.|:|             ..:.|.|.|   ||:|:   
Zfish   258 GRGGFRGGFRDGGGDESGKRG-FGRGGFRGRNEEVFSKVTTADKLDQEGSENAG---PKVVYVPP 318

  Fly   110 --SEVNLTPFRK-----NFYKPCDSVLARTVGETETFLTSNEITIKGDQVPTPSIEFEEGGFPDY 167
              .|...:.|..     ||.| .|.:|               :.:.|...|...:.|||.|..|.
Zfish   319 PPPEEESSIFSHYATGINFDK-YDDIL---------------VDVSGSNPPKAIMTFEEAGLCDS 367

  Fly   168 VMNEIRKQGFAKPTAIQAQGWPIAMSGRDLVGVAQTGSGKTLAYVLPAVVHINNQPRLER--GDG 230
            :...:.|.|:.|||.:|..|.||..:||||:..||||||||.|::||.         |:|  .||
Zfish   368 LSKNVSKSGYVKPTPVQKHGIPIISAGRDLMACAQTGSGKTAAFLLPI---------LQRFMTDG 423

  Fly   231 -----------PIALVLAPTRELAQQIQQVAIEFGSNTHVRNTCIFGGAPKGQQARDLERGVEIV 284
                       |.|:::||||||..||...|.:|...|.||...::||...|...|::.:|..::
Zfish   424 VAASKFSEIQEPEAIIVAPTRELINQIYLEARKFAYGTCVRPVVVYGGINTGYTIREVLKGCNVL 488

  Fly   285 IATPGRLIDFLERGTTSLKRCTYLVLDEADRMLDMGFEPQIRKIM----QQIRPDRQVLMWSATW 345
            .||||||.|.:.||...|.:..|||||||||||||||||::||::    ...:.:||.||:|||:
Zfish   489 CATPGRLHDLIGRGKIGLSKVRYLVLDEADRMLDMGFEPEMRKLVASPGMPSKEERQTLMFSATY 553

  Fly   346 PKEVRQLAEEFLN-NYIQVNIGSLSLSANHNILQIVDVCDENEKLMKLIKLLTDISAENETKTII 409
            |::::::|.:||. :||.:.:|.:. .|..::.|.:...|:..|..:|::||   .|....:|::
Zfish   554 PEDIQRMAADFLKVDYIFLAVGVVG-GACSDVEQTIVQVDQYSKRDQLLELL---RATGNERTMV 614

  Fly   410 FVETKKRVDEITRNISRQGWRACAIHGDKSQQERDFVLSSFRNGRHSILVATDVAARGLDVDDVK 474
            |||||:..|.|...:.::.....:||||:.|:||:..||.||.|:..:||||.|||||||::.|:
Zfish   615 FVETKRSADFIATFLCQEKISTTSIHGDREQREREKALSDFRLGQCPVLVATSVAARGLDIEQVQ 679

  Fly   475 FVINYDYPSNSEDYVHRIGRTGRSNNTGTAYTLFT-HSNANKANDLIQVLREANQTINPKLMNMA 538
            .|:|:|.||:.::||||||||||..|||.|.:.|. .|:...|..|::||..|.|.:...|..:|
Zfish   680 HVVNFDMPSSIDEYVHRIGRTGRCGNTGRAVSFFNPESDTPLARSLVKVLSGAQQVVPKWLEEVA 744

  Fly   539 MNG----GYNKRG-------GGMGGGYR 555
            .:.    |:|.||       ...||.::
Zfish   745 FSAHGTTGFNPRGKVFASTDSRKGGSFK 772

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10077NP_648062.2 DEAD-like_helicase_N 49..544 CDD:475120 196/542 (36%)
ddx4XP_073769595.1 None

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