DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10077 and glh-2

DIOPT Version :10

Sequence 1:NP_648062.2 Gene:CG10077 / 38756 FlyBaseID:FBgn0035720 Length:818 Species:Drosophila melanogaster
Sequence 2:NP_491876.1 Gene:glh-2 / 172361 WormBaseID:WBGene00001599 Length:974 Species:Caenorhabditis elegans


Alignment Length:678 Identity:207/678 - (30%)
Similarity:295/678 - (43%) Gaps:134/678 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 NMYNGQMNAFGGGGGGGAG---GLAGGMVPNR----------MGGGAPGGGPGGAGMFQ------ 47
            |.:.|..:.||||.|||.|   ||..|.....          .||.:.|.|.||.|..:      
 Worm   308 NGFTGGSSGFGGGNGGGTGFDSGLTNGFGSGNNGESGFGSGGFGGNSNGFGSGGGGQDRGERNNN 372

  Fly    48 ---------RNRSAP---------------YPGFNGHGPANGGQRRMNGGGPSMGPGGPRNQDGF 88
                     |:...|               .||.|........:.|....|.:.|.|| .|..||
 Worm   373 CFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGG-GNDGGF 436

  Fly    89 GGQNG----------------------------------------GQRSS--------NHGA--H 103
            ||.|.                                        |.||:        ..||  .
 Worm   437 GGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNECPNPAKPREGAEGE 501

  Fly   104 LPKIVWSEV--NLTPFRKNFYKPCDSVLARTVGETETFLTSNEITIKGDQVPTPSIEFEEGGFPD 166
            .||..:..|  |:... .|..|..:.::.....:.|..:||::..:......|    |.|....:
 Worm   502 GPKATYVPVEDNMEEV-FNMQKISEGLMFNKFFDAEVKITSDKKPVGVKTCKT----FSEANLGE 561

  Fly   167 YVMNEIRKQGFAKPTAIQAQGWPIAMSGRDLVGVAQTGSGKTLAYVLPAVVHINNQPRLE-RGDG 230
            .:...:...|:.|.|.||....|:...|.|::..||||||||.|::||.:..:.::..|. .|:|
 Worm   562 TMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEG 626

  Fly   231 ---PIALVLAPTRELAQQIQQVAIEFGSNTHVRNTCIFGGAPKGQQARDLERGVEIVIATPGRLI 292
               |..::|.|||||..||.....:|...|.:....::||...|.....:|:|..|::.|.||:.
 Worm   627 GCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKGATIIVGTVGRIK 691

  Fly   293 DFLERGTTSLKRCTYLVLDEADRMLD-MGFEPQIRKIM----QQIRPDRQVLMWSATWPKEVRQL 352
            .|.|.||..|.:|.:.||||||||:| |||...|..|:    ...:.:||.||:|||:|..|::.
 Worm   692 HFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNYESMPKKENRQTLMFSATFPDSVQEA 756

  Fly   353 AEEFL-NNYIQVNIGSLSLSANHNILQIVDVCDENEKLMKLIKLL--------TDISAENET-KT 407
            |...| ..||.:.|..:. :||..:||..:.||.:||..||:::|        |:.::|..| ||
 Worm   757 ARNHLKEGYIMLAIDKIG-AANKCVLQEFEKCDRSEKKDKLLEILGIDIDSYTTEKNSEVYTKKT 820

  Fly   408 IIFVETKKRVDEITRNISRQGWRACAIHGDKSQQERDFVLSSFRNGRHSILVATDVAARGLDVDD 472
            |:||..:...|.:...:|.....|..|||.:.|:||...|..||||...:|:||.||.||||:..
 Worm   821 IVFVSQRAMADTLASILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKG 885

  Fly   473 VKFVINYDYPSNSEDYVHRIGRTGRSNNTGTAYTLFTHSNANKANDLIQVLREANQTINPKLMNM 537
            |..|||||.|.|.:||:||||||||..|.|.| |.|...:.|..::|::||.:|:|.: |:.|. 
 Worm   886 VDHVINYDMPDNIDDYIHRIGRTGRVGNAGRA-TSFISEDCNLLSELVRVLSDADQLV-PEWMQ- 947

  Fly   538 AMNGGYNKRGGGMGGGYRGGNGYQGRNP 565
                      |..||.:....|::...|
 Worm   948 ----------GASGGNFGASFGFESSVP 965

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10077NP_648062.2 DEAD-like_helicase_N 49..544 CDD:475120 181/580 (31%)
glh-2NP_491876.1 Keratin_2_head 73..>177 CDD:465068
PTZ00368 <250..300 CDD:173561
PTZ00368 373..508 CDD:173561 23/135 (17%)
SrmB 553..924 CDD:440279 144/376 (38%)
Blue background indicates that the domain is not in the aligned region.

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