DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10077 and Ddx4

DIOPT Version :10

Sequence 1:NP_648062.2 Gene:CG10077 / 38756 FlyBaseID:FBgn0035720 Length:818 Species:Drosophila melanogaster
Sequence 2:XP_011242920.1 Gene:Ddx4 / 13206 MGIID:102670 Length:738 Species:Mus musculus


Alignment Length:605 Identity:204/605 - (33%)
Similarity:304/605 - (50%) Gaps:90/605 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 FGGGGGGGAGGLAGGMVPNRMGGGAPG-------GGPGGAGMFQRNRSAPYPGFNGHGPANGGQR 68
            |..||.|...|..||     .|.|.|.       |...|.|:|...:.|          |:...:
Mouse   151 FRRGGRGSFRGCRGG-----FGLGRPNSESDQDQGTQRGGGLFGSRKPA----------ASDSVQ 200

  Fly    69 RMNGGGPSMGPGGPRNQDGFGGQN-----------------GGQRSSNHGAHLPKIVWSEVNLTP 116
            .:.|.|.:........:.|:.|.|                 ||:.|.:.|   ||:.        
Mouse   201 CLTGNGDTYQSRSGSGRGGYKGLNEEVVTGSGKNSWKSETEGGESSDSQG---PKVT-------- 254

  Fly   117 FRKNFYKPC------DSVLAR-----TVGETETFLTSNEITIKGDQVPTPSIEFEEGGFPDYVMN 170
                 |.|.      ||:.|.     ...:.:|.|    :.:.|...|...:.|||......:.|
Mouse   255 -----YIPPPPPEDEDSIFAHYQTGINFDKYDTIL----VEVSGHDAPPAILTFEEANLCQTLNN 310

  Fly   171 EIRKQGFAKPTAIQAQGWPIAMSGRDLVGVAQTGSGKTLAYVLPAVVHINNQ----PRLERGDGP 231
            .|.|.|:.|.|.:|....||.::||||:..||||||||.|::||.:.|:...    .|.:....|
Mouse   311 NIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAHMMRDGITASRFKELQEP 375

  Fly   232 IALVLAPTRELAQQIQQVAIEFGSNTHVRNTCIFGGAPKGQQARDLERGVEIVIATPGRLIDFLE 296
            ..:::||||||..||...|.:|...|.||...|:||...|...|.:.:|..|:.||||||:|.:.
Mouse   376 ECIIVAPTRELINQIYLEARKFSFGTCVRAVVIYGGTQFGHSVRQIVQGCNILCATPGRLMDIIG 440

  Fly   297 RGTTSLKRCTYLVLDEADRMLDMGFEPQIRKIM----QQIRPDRQVLMWSATWPKEVRQLAEEFL 357
            :....||:..|||||||||||||||.|:::|::    ...:..||.|::|||:|:|:::||.:||
Mouse   441 KEKIGLKQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLLFSATFPEEIQRLAGDFL 505

  Fly   358 -NNYIQVNIGSLSLSANHNILQIVDVCDENEKLMKLIKLLTDISAENETKTIIFVETKKRVDEIT 421
             ::|:.|.:|.:. .|..::.|.:....:..|..||:::|.:|..|   :|::||||||:.|.|.
Mouse   506 KSSYLFVAVGQVG-GACRDVQQTILQVGQYSKREKLVEILRNIGDE---RTMVFVETKKKADFIA 566

  Fly   422 RNISRQGWRACAIHGDKSQQERDFVLSSFRNGRHSILVATDVAARGLDVDDVKFVINYDYPSNSE 486
            ..:.::.....:||||:.|:||:..|..||.|:..:||||.|||||||:::|:.|||:|.||..:
Mouse   567 TFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAARGLDIENVQHVINFDLPSTID 631

  Fly   487 DYVHRIGRTGRSNNTGTAYTLF-THSNANKANDLIQVLREANQTINPKLMNMAMNG------GYN 544
            :||||||||||..|||.|.:.| |.|:.:.|..|::||.:|.|.:...|..:|.:.      ..:
Mouse   632 EYVHRIGRTGRCGNTGRAISFFDTDSDNHLAQPLVKVLSDAQQDVPAWLEEIAFSTYVPPSFSSS 696

  Fly   545 KRGGGMGGGYRGGNGYQGRN 564
            .|||.:.........|||::
Mouse   697 TRGGAVFASVDTRKNYQGKH 716

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10077NP_648062.2 DEAD-like_helicase_N 49..544 CDD:475120 184/538 (34%)
Ddx4XP_011242920.1 DEADc_DDX4 266..518 CDD:350810 97/255 (38%)
SF2_C_DEAD 524..653 CDD:350174 59/131 (45%)

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