DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10077 and ddx41

DIOPT Version :10

Sequence 1:NP_648062.2 Gene:CG10077 / 38756 FlyBaseID:FBgn0035720 Length:818 Species:Drosophila melanogaster
Sequence 2:NP_001427830.1 Gene:ddx41 / 108179221 ZFINID:ZDB-GENE-030131-1927 Length:613 Species:Danio rerio


Alignment Length:431 Identity:164/431 - (38%)
Similarity:246/431 - (57%) Gaps:22/431 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 ITIKGDQVPTPSIEFEEGGFPDYVMNEIRKQGFAKPTAIQAQGWPIAMSGRDLVGVAQTGSGKTL 209
            |.::|:.:|.|...|.|..||..::..::|:|...||.||.||.|..:||||::|:|.|||||||
Zfish   160 ILVEGEGIPAPIKSFREMKFPQAILKGLKKKGIVHPTPIQIQGIPTILSGRDMIGIAFTGSGKTL 224

  Fly   210 AYVLPAVVH-INNQPRLE--RGDGPIALVLAPTRELAQQIQQV------AIEFGSNTHVRNTCIF 265
            .:.||.::. :..:.||.  :.:||..|::.|:||||:|...:      .:|......:|.....
Zfish   225 VFTLPIIMFCLEQEKRLPFCKREGPYGLIICPSRELARQTHGIIEYYCKLLEDEGAPQMRCALCI 289

  Fly   266 GGAPKGQQARDLERGVEIVIATPGRLIDFLERGTTSLKRCTYLVLDEADRMLDMGFEPQIRKIMQ 330
            ||....:|...::.||.:::||||||:|.|.:...||..|.||.|||||||:|||||..||.|..
Zfish   290 GGMSVKEQMEVVKHGVHMMVATPGRLMDLLNKKMVSLDICRYLALDEADRMIDMGFEEDIRTIFS 354

  Fly   331 QIRPDRQVLMWSATWPKEVRQLAEEFLNNYIQVNIGSLSLSANHNILQIVDVCDENEKLMKLIKL 395
            ..:..||.|::|||.||:::..|:..|...|.:|:|... :|:.:::|.|:...|..|::.|::.
Zfish   355 YFKGQRQTLLFSATMPKKIQNFAKSALVKPITINVGRAG-AASLDVIQEVEYVKEEAKMVYLLEC 418

  Fly   396 LTDISAENETKTIIFVETKKRVDEITRNISRQGWRACAIHGDKSQQERDFVLSSFRNGRHSILVA 460
            |    .:.....:||.|.|..||.|...:..:|..|.||||.|.|:||...:.:|:.|:..:|||
Zfish   419 L----QKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFKEGKKDVLVA 479

  Fly   461 TDVAARGLDVDDVKFVINYDYPSNSEDYVHRIGRTGRSNNTGTAYTLFTHSNANKA--NDLIQVL 523
            ||||::|||...::.|:|||.|...|:|||||||||||..||.| |.|.:...:::  .||..:|
Zfish   480 TDVASKGLDFPAIQHVVNYDMPEEIENYVHRIGRTGRSGKTGIA-TTFINKGCDESVLMDLKALL 543

  Fly   524 REANQTINPKLMNMAMNGGYNKR---GGGMGGGYRGGNGYQ 561
            .||.|.:.|.|  ..::.|....   ||..|..:.||.|::
Zfish   544 VEAKQKVPPVL--QVLHTGDETMLDIGGERGCTFCGGLGHR 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10077NP_648062.2 DEAD-like_helicase_N 49..544 CDD:475120 158/409 (39%)
ddx41NP_001427830.1 None

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