DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10077 and ddx59

DIOPT Version :9

Sequence 1:NP_001261491.1 Gene:CG10077 / 38756 FlyBaseID:FBgn0035720 Length:818 Species:Drosophila melanogaster
Sequence 2:XP_031756897.1 Gene:ddx59 / 100488709 XenbaseID:XB-GENE-976229 Length:785 Species:Xenopus tropicalis


Alignment Length:394 Identity:141/394 - (35%)
Similarity:232/394 - (58%) Gaps:9/394 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 ITIKGDQVPTPSIEFEEGGFPDYVMNEIRKQGFAKPTAIQAQGWPIAMSGRDLVGVAQTGSGKTL 209
            :::.|:::..|.:||:...||..:.:.|:..|:..||.||.|..|:.:.|||::..|.||||||.
 Frog   358 LSVHGNEMCKPIMEFDHCQFPPVLSSNIKAAGYEVPTPIQMQMIPVGLMGRDILASADTGSGKTA 422

  Fly   210 AYVLPAVVHINNQPRLERGDGPIALVLAPTRELAQQIQQVAIEFGSN-THVRNTCIFGGAPKGQQ 273
            |::|||::..     ||:.|.|.||:|.||||||.||:..|.|.... .|:|...:.||.|...|
 Frog   423 AFLLPAIIRC-----LEKKDSPAALILTPTRELAVQIEGQAKELMRGIPHMRTALLVGGMPLPPQ 482

  Fly   274 ARDLERGVEIVIATPGRLIDFLERGTTSLKRCTYLVLDEADRMLDMGFEPQIRKIMQQIRPDRQV 338
            ...|::||:::|||||||::.:::.:.:|.....|::||||.||.|||:.|:..|::.:..|.|.
 Frog   483 IHRLKQGVQVIIATPGRLLEIIKQDSVNLGDLKILIVDEADTMLKMGFQQQVLDILEVVPHDHQT 547

  Fly   339 LMWSATWPKEVRQLAEEFLNNYIQVNIGSLSLSANHNILQIVDVCDENEKLMKLIKLLTDISAEN 403
            ::.|||.|..:....::.|.:.:::.:|..:.... |:.|||...:|..|..||.::|.| |...
 Frog   548 ILVSATIPAGIEAFTKQLLQDPVRITVGEKNQPCT-NVRQIVLWVEEPSKKKKLFEILND-SKLF 610

  Fly   404 ETKTIIFVETKKRVDEITRNISR-QGWRACAIHGDKSQQERDFVLSSFRNGRHSILVATDVAARG 467
            :...::||:.:...|.::..:|: .|....|:|.||||.||..:|.....|.:.::|:|.|..||
 Frog   611 QPPVLVFVDCRLGADLLSDAVSKITGLECVAMHSDKSQVERMKILQGLLQGEYDVVVSTGVLGRG 675

  Fly   468 LDVDDVKFVINYDYPSNSEDYVHRIGRTGRSNNTGTAYTLFTHSNANKANDLIQVLREANQTINP 532
            ||:.:||.|:|:|.||:.::|||:|||.||..:.|||.|....:|.|...||::.::.....:.|
 Frog   676 LDLVNVKLVVNFDMPSSMDEYVHQIGRAGRLGHRGTAITFINKNNRNLFWDLVKRVQPTGSLLPP 740

  Fly   533 KLMN 536
            :|:|
 Frog   741 QLLN 744

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10077NP_001261491.1 PTZ00110 49..544 CDD:240273 141/394 (36%)
DEADc 159..364 CDD:238167 78/205 (38%)
HELICc 375..507 CDD:238034 51/132 (39%)
ddx59XP_031756897.1 PHA03247 <29..211 CDD:223021
PLN00206 217..759 CDD:215103 141/394 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.