DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10077 and Ddx55

DIOPT Version :9

Sequence 1:NP_001261491.1 Gene:CG10077 / 38756 FlyBaseID:FBgn0035720 Length:818 Species:Drosophila melanogaster
Sequence 2:NP_001258255.1 Gene:Ddx55 / 100362764 RGDID:2324094 Length:600 Species:Rattus norvegicus


Alignment Length:412 Identity:131/412 - (31%)
Similarity:209/412 - (50%) Gaps:59/412 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   168 VMNEIRKQGFAKPTAIQAQGWPIAMSGRDLVGVAQTGSGKTLAYVLPAV-VHINNQPRLERGD-G 230
            |:..:|:.||...|.:|:...|:.|..:|:...|.||||||||:|:|.: :.:..:.:|::.. |
  Rat    20 VLGALRELGFLHMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLRREEKLKKNQVG 84

  Fly   231 PIALVLAPTRELAQQIQQVAIEFGSNTHVRNTCIF-GGAPKGQQARDLER----GVEIVIATPGR 290
              |:|:.||||||.||.:|...|..:....:..:: ||...|:   |:||    |..|::|||||
  Rat    85 --AIVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGE---DVERFKQHGGNIIVATPGR 144

  Fly   291 LIDFLERGTTSLKRCTY------LVLDEADRMLDMGFEPQIRKIMQQIRPDRQVLMWSATWPKEV 349
            |.|...|....|...:|      ||||||||:||||||..|..|::.:...|:..::|||..:||
  Rat   145 LEDMFRRKAEGLDLASYVKSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSATQTQEV 209

  Fly   350 RQLAEEFLNNYIQVNIGSLSLSA-----------NHNILQIVDVCDENEKLMKLIKLLTDISAEN 403
            ..|....|.|.:::::....::|           ||.:     :|..:||..:|:..|   .:..
  Rat   210 ENLVRAGLRNPVRISVKEKGVAASSTQKTPSRLENHYM-----ICKADEKFNQLVHFL---RSRQ 266

  Fly   404 ETKTIIFVET-------KKRVDEITRNISRQGWRACAIHGDKSQQERDFVLSSFRNGRHSILVAT 461
            :.|.::|..|       .|.::.:.:.:     :...||| |.:.:|:.:...||..:..|||.|
  Rat   267 QEKHLVFFSTCACVEYYGKALEALVQRV-----KILCIHG-KMKYKRNKIFMEFRKLQSGILVCT 325

  Fly   462 DVAARGLDVDDVKFVINYDYPSNSEDYVHRIGRTGRSNNTGTAYTLFTHSNANKANDL------- 519
            ||.|||:|:.:|.:|:.||.|||:..:|||.|||.|..:.|:|............|.|       
  Rat   326 DVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSALVFLLPMEEAYINFLAINQKCP 390

  Fly   520 IQVLREANQTIN--PKLMNMAM 539
            :|.:.....|::  |||..||:
  Rat   391 LQEMSLQRNTVDLLPKLRAMAL 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10077NP_001261491.1 PTZ00110 49..544 CDD:240273 131/412 (32%)
DEADc 159..364 CDD:238167 77/208 (37%)
HELICc 375..507 CDD:238034 42/138 (30%)
Ddx55NP_001258255.1 DEADc 9..224 CDD:238167 77/208 (37%)
DEXDc 24..228 CDD:214692 76/208 (37%)
Helicase_C 252..363 CDD:278689 39/119 (33%)
DUF4217 403..462 CDD:290667 5/10 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0331
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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