DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10077 and tdrd12

DIOPT Version :9

Sequence 1:NP_001261491.1 Gene:CG10077 / 38756 FlyBaseID:FBgn0035720 Length:818 Species:Drosophila melanogaster
Sequence 2:XP_021326385.1 Gene:tdrd12 / 100334979 ZFINID:ZDB-GENE-121214-348 Length:1150 Species:Danio rerio


Alignment Length:409 Identity:84/409 - (20%)
Similarity:169/409 - (41%) Gaps:43/409 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   168 VMNEIRK----QGFAKPTAIQAQGWPIAMSGRDLVGVAQTGSGKTLAYVLPAVV---HINNQPRL 225
            :..:.||    :.::.|...::..||....|.|.|.|:.:|. ..|:|:.|.::   .::....|
Zfish   440 ITEQFRKFLLWRKYSGPNVAESYCWPAVARGFDTVLVSHSGD-NPLSYIPPLLMILQTVSVVSSL 503

  Fly   226 ERGDGPIALVLAPTRELAQQIQQVAIEFGSNTH-VRNTCIFGGAPKGQQAR-DLERGVEIVIATP 288
            ....||:|::|.|..|..|.:.:: :|....|| :..|.:..|..:.:..: .:::..::::.||
Zfish   504 AARTGPVAVILCPGWEKVQTVLEL-LEDSKATHGLHPTSVLLGVDQDEPKKFKIQKNCQLLVTTP 567

  Fly   289 GRLIDFLERGTTSLKRCTYLVLDEADRMLDMGFEPQIRKIM----------QQIRPDRQVLMWSA 343
            ..|:..||.......|..:|||||||.:.... ..||..|:          :::...||::....
Zfish   568 FSLLRLLEAQCFLFLRLCHLVLDEADLLYSQA-PDQISIILKHFQQLVCAEERVACPRQIIAVGG 631

  Fly   344 TWPKEVRQLAEEFLNNYIQVNIGSLSLSANHNILQIVDVCDENEKLMKLIKLLTDISAENETKTI 408
            .|...:..|..|.:.:...:.......:....:.|.|.:|.:.:|:..|:..| |.......||:
Zfish   632 RWSAGIDGLVREHMIHPTVIITVMEEAALYGRVHQRVQLCLDCDKVSVLLSSL-DFQPPKPQKTL 695

  Fly   409 IFVETKKRVDEITRNISRQGWRACAIHGDKSQQERDFVLSSFR----NGRHSILVATDVAARGLD 469
            |...:.:..:.:.:.:..........|.|.:.| .||::..:|    .|...|||.|:...:.|.
Zfish   696 IITNSAEETEHVYKAVVNTAVFTLKAHEDATDQ-FDFIIDQWRKDISQGTQVILVTTNDCLKALG 759

  Fly   470 VDDVKFVINYDYPSN-----------SEDYVHRIGRTGRSNN---TGTAYTLFTHSNANKANDLI 520
            :.|...|::|.:||.           ||:: .::.....|.:   ...:..|.:..|......::
Zfish   760 IRDATCVVHYGFPSTPKLFGSRLFCMSENF-RKLSDMDHSEDWTPGAQSVLLLSEQNVRHVCGVL 823

  Fly   521 QVLREANQTINPKLMNMAM 539
            :.||.....:.|:|:..|:
Zfish   824 RYLRRTGALLPPELLQFAL 842

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10077NP_001261491.1 PTZ00110 49..544 CDD:240273 84/409 (21%)
DEADc 159..364 CDD:238167 47/214 (22%)
HELICc 375..507 CDD:238034 30/149 (20%)
tdrd12XP_021326385.1 TUDOR 9..130 CDD:306940
SrmB 463..>781 CDD:223587 71/322 (22%)
TUDOR 912..1010 CDD:306940
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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