DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10077 and Ddx43

DIOPT Version :9

Sequence 1:NP_001261491.1 Gene:CG10077 / 38756 FlyBaseID:FBgn0035720 Length:818 Species:Drosophila melanogaster
Sequence 2:NP_001177973.1 Gene:Ddx43 / 100048658 MGIID:3642857 Length:646 Species:Mus musculus


Alignment Length:595 Identity:215/595 - (36%)
Similarity:324/595 - (54%) Gaps:62/595 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 GQMNAFGGGGG-----GGAGGLAGGM--------VPNRMGGGAPGGGPGGAGMFQRNRSAPYPGF 57
            |::.:.|.|||     |.|...|.|.        |.|.:.|...|.|.......|...:......
Mouse    39 GRVGSRGAGGGWREPAGAAEATAAGRREPPLCFGVKNDVVGAVIGRGGSKIREIQNTTNTRIQVI 103

  Fly    58 NGHGPAN---GGQRRMNGGGPSMGPGGPRNQDGF-GGQN----------GGQRSSNHGA--HLPK 106
            .|:..|.   .|.:.|.....::.....:.|..: .||.          |...|::...  ..|.
Mouse   104 KGNPEAEIKIFGNKAMQTKAKTVIDNVVKKQQNYIPGQRVGIIAFQPTVGADTSTSESVTDDQPL 168

  Fly   107 IVWSEV-------------NLTPFRKNFYKPCDSVLARTVGET-------ETF-LTSNEITIKGD 150
            |.|.::             :|.|.:||||  .:|....::.:.       |.| :|.:::. .|:
Mouse   169 IDWDQIREDALKWEKKKWADLPPIKKNFY--IESATTSSMSQVQIDNWRKENFNITCDDLK-DGE 230

  Fly   151 Q--VPTPSIEFEEGGFPDY--VMNEIRKQGFAKPTAIQAQGWPIAMSGRDLVGVAQTGSGKTLAY 211
            :  :|.|..:||: .|..|  ||..|::.||.|||.||:|.|||.:.|.||:||||||:||||:|
Mouse   231 KRPIPNPICKFED-AFQSYPEVMENIKRAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGKTLSY 294

  Fly   212 VLPAVVHINNQP-RLERGDGPIALVLAPTRELAQQIQQVAIEFGSNTHVRNTCIFGGAPKGQQAR 275
            ::|..:|:::|| ..|:.:||..|||.||||||.|::....:: |...:::.|::||..:..|.:
Mouse   295 LMPGFIHLDSQPLAREQRNGPGMLVLTPTRELALQVEAECSKY-SYGDLKSVCVYGGGDRDGQIQ 358

  Fly   276 DLERGVEIVIATPGRLIDFLERGTTSLKRCTYLVLDEADRMLDMGFEPQIRKIMQQIRPDRQVLM 340
            |:.:||:|:|||||||.|.......:||..|||||||||:||||||||||.||:..:|||||.:|
Mouse   359 DVSKGVDIIIATPGRLNDLQMNNFVNLKSVTYLVLDEADKMLDMGFEPQIMKILLDVRPDRQTIM 423

  Fly   341 WSATWPKEVRQLAEEFLNNYIQVNIGSLSLSANHNILQIVDVCDENEKLMKLIKLLTDISAENET 405
            .|||||..||:||:.:|...:.|.:|:|.|.|...:.|.:.:..|.||...:...|.::|.::  
Mouse   424 TSATWPYAVRRLAQSYLKEPMIVYVGTLDLVAVSTVKQNIIITTEEEKRTHIQTFLENMSPKD-- 486

  Fly   406 KTIIFVETKKRVDEITRNISRQGWRACAIHGDKSQQERDFVLSSFRNGRHSILVATDVAARGLDV 470
            |.|:||..|...|.::.::..:.....::||::.|.:|:..|.:|:.|:..||:|||:|:|||||
Mouse   487 KVIVFVSRKAVADHLSSDLILRHISVESLHGNREQSDREKALENFKTGKVRILIATDLASRGLDV 551

  Fly   471 DDVKFVINYDYPSNSEDYVHRIGRTGRSNNTGTAYTLFTHSNANKANDLIQVLREANQTINPKLM 535
            .|:..|.|||:|.|.|:||||:|||||:..||.:.||.|.::...|.:||.:|..|||.|..:|:
Mouse   552 HDITHVYNYDFPRNIEEYVHRVGRTGRAGRTGMSITLITRNDWRVATELINILERANQNIPEELV 616

  Fly   536 NMAMNGGYNK 545
            .||.....||
Mouse   617 LMAERYKANK 626

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10077NP_001261491.1 PTZ00110 49..544 CDD:240273 198/536 (37%)
DEADc 159..364 CDD:238167 105/207 (51%)
HELICc 375..507 CDD:238034 49/131 (37%)
Ddx43NP_001177973.1 KH-I 73..127 CDD:238053 10/53 (19%)
DEADc 249..446 CDD:238167 101/197 (51%)
DEXDc 255..453 CDD:214692 102/198 (52%)
HELICc 461..588 CDD:238034 49/128 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000439
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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