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Protein Alignment CG14820 and Cpa2

DIOPT Version :9

Sequence 1:	NP_648060.1	Gene:	CG14820 / 38754	FlyBaseID:	FBgn0035718	Length:	416	Species:	Drosophila melanogaster
Sequence 2:	NP_001013101.2	Gene:	Cpa2 / 296959	RGDID:	1305563	Length:	417	Species:	Rattus norvegicus

Alignment Length:	418	Identity:	132/418 - (31%)
Similarity:	221/418 - (52%)	Gaps:	19/418 - (4%)

- Green bases have known domain annotations that are detailed below.

  Fly     6 LLVVGLFGLARSVEQVRYDNYKVYNVRIDDLEQFK-LLHTQ-ERSLKLSSWREARHLGESSDIML 68
            ||:..|.|.....|....|  :|..:.....||.: ||..: |..|:|..|:.....||:..:.:
  Rat     5 LLLAALLGYIYCQETFVGD--QVLEIIPSHEEQIRTLLQLEAEEHLELDFWKSPTIPGETVHVRV 67

  Fly    69 PPEYQKTFESLLTKHNFTYNLKIDNVQTHIDAQR-------PKQRITSMEWTQFHTLEEIYAWLD 126
            |....:..:..|......|::.|::||..:|.:|       .::|..:..:..:|||||||..:|
  Rat    68 PFASIQAVKVFLESQGIDYSIMIEDVQVLLDQEREEMLFNQQRERGGNFNFEAYHTLEEIYQEMD 132

  Fly   127 VIEDRYPDIVTPFTIGNSYEGRPIRGVKISYKEGNPAVFIESNIHAREWITSATITYFIDELL-- 189
            .:....|.:|:...||:|:|.||:..:|.|.....||:::::.||||||:|.||..:..:::.
  Rat   133 NLVAENPGLVSKVNIGSSFENRPMNVLKFSTGGDKPAIWLDAGIHAREWVTQATALWTANKIASD 197

  Fly   190 VPRNPAVRDIAQNVDWYIIPVLNTDGFAYSHEVERLWRKSRLPSDPTGECIGTDLNRNFDYLWML 254
            ...:||:..:...:|.:::||.|.||:.:|....|:|||:|.....:| |:|.|.|||:|..:..
  Rat   198 YGTDPAITSLLNTLDIFLLPVTNPDGYVFSQTTNRMWRKTRSKRSGSG-CVGVDPNRNWDANFGG 261

  Fly   255 TGAESDPCSQLYAGPSPESDPEISQLTAYINNSIPEGTIKIYISLHSYGQYVLSPWGHTALEFPE 319
            .||.|.|||..|.||.|.|:.|:..:..:|.:   .|.:|.:|:||||.|.::.|:|:...: |:
  Rat   262 PGASSSPCSDSYHGPKPNSEVEVKSIVDFIKS---HGKVKAFITLHSYSQLLMFPYGYKCTK-PD 322

  Fly   320 HYPQMMHVAKGFSDALYRRYGTVFTYGSSATTLYEVSGSGKEWAYAVKNIKIHYTIELRDKGELG 384
            .:.::..||:..:.||.|.:||.:..|...:.:|:.||...:|||.: .||..:..||||.|..|
  Rat   323 DFNELDEVAQKAAQALKRLHGTSYKVGPICSVIYQASGGSIDWAYDL-GIKYSFAFELRDTGFYG 386

  Fly   385 FVLPPEDIIPVAREVTEGFVGMIAAARE 412
            |:||.:.|:|.|.|...|...::...|:
  Rat   387 FLLPAKQILPTAEETWLGLKTIMEHVRD 414

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.