back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG14820 and Cpa2

DIOPT Version :9

Sequence 1:	NP_648060.1	Gene:	CG14820 / 38754	FlyBaseID:	FBgn0035718	Length:	416	Species:	Drosophila melanogaster
Sequence 2:	NP_001019869.1	Gene:	Cpa2 / 232680	MGIID:	3617840	Length:	417	Species:	Mus musculus

Alignment Length:	418	Identity:	137/418 - (32%)
Similarity:	228/418 - (54%)	Gaps:	21/418 - (5%)

- Green bases have known domain annotations that are detailed below.

  Fly     7 LVVGLFGLARSVEQVRYDNYKVYNVRIDDLEQFK-LLHTQ-ERSLKLSSWREARHLGESSDIMLP 69
            |:|.|||.....|....|  :|..|..:|.||.| ||..: |..|:|..|:......::..:.:|
Mouse     6 LLVALFGYIYCQETFVGD--QVLEVIPNDEEQIKTLLQLEAEEHLELDFWKSPSVPRQTVHVRVP 68

  Fly    70 PEYQKTFESLLTKHNFTYNLKIDNVQTHIDAQR-------PKQRITSMEWTQFHTLEEIYAWLDV 127
            ....:..:..|.....||::.|::||..:|.:|       .::|.|:..:..:|||||||..:|.
Mouse    69 FASIQDVKVFLESQGITYSIMIEDVQVLLDQEREEMLFNQQRERGTNFNFGAYHTLEEIYQEMDN 133

  Fly   128 IEDRYPDIVTPFTIGNSYEGRPIRGVKISYKEGNPAVFIESNIHAREWITSATITYFIDELL--V 190
            :....|.:|:...||:|:|.||:..:|.|.....||:::::.||||||:|.||..:..:::.  .
Mouse   134 LVAENPGLVSKVNIGSSFENRPMNVLKFSTGGDKPAIWLDAGIHAREWVTQATALWTANKIASDY 198

  Fly   191 PRNPAVRDIAQNVDWYIIPVLNTDGFAYSHEVERLWRKSRLPSDPTGE-CIGTDLNRNFDYLWML 254
            ..:||:..:...:|.:::||.|.||:.:|....|:|||:|  |..:|. |:|.|.|||:|..:..
Mouse   199 GTDPAITSLLNTLDVFLLPVTNPDGYVFSQTSNRMWRKTR--SKRSGSFCVGVDPNRNWDANFGG 261

  Fly   255 TGAESDPCSQLYAGPSPESDPEISQLTAYINNSIPEGTIKIYISLHSYGQYVLSPWGHTALEFPE 319
            .||.|:|||..|.||||.|:.|:..:..:|.:   .|.:|.:|:||||.|.::.|:|:...: |:
Mouse   262 PGASSNPCSDSYHGPSPNSEVEVKSIVDFIKS---HGKVKAFITLHSYSQLLMFPYGYKCAK-PD 322

  Fly   320 HYPQMMHVAKGFSDALYRRYGTVFTYGSSATTLYEVSGSGKEWAYAVKNIKIHYTIELRDKGELG 384
            .:.::..||:..:.:|.|.:||.:..|...:.:|:.||...:|||.: .||..:..||||.|..|
Mouse   323 DFNELDEVAQRAAQSLKRLHGTSYKVGPICSVIYQASGGSIDWAYDL-GIKYSFAFELRDTGYYG 386

  Fly   385 FVLPPEDIIPVAREVTEGFVGMIAAARE 412
            |:||.:.|:|.|.|...|...::...|:
Mouse   387 FLLPAKQILPTAEETWLGLKTIMEHVRD 414

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.