DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14820 and sdc-3

DIOPT Version :9

Sequence 1:NP_648060.1 Gene:CG14820 / 38754 FlyBaseID:FBgn0035718 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_506703.1 Gene:sdc-3 / 180009 WormBaseID:WBGene00004747 Length:2150 Species:Caenorhabditis elegans


Alignment Length:426 Identity:74/426 - (17%)
Similarity:141/426 - (33%) Gaps:135/426 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 VEQVRYDNYKVYNVRIDDLEQFKLLH---TQERSLKLSSWREAR--------------------- 58
            :|.|| |..|.:..|.:..|:.|.::   .:::..:...|.|.|                     
 Worm   839 LEIVR-DKLKSWIYRTELWEKMKPVYERLKRDKEKREKEWHEMRAAQRAQKEKEEEDQRRMDMGI 902

  Fly    59 -HLGES----------SDIMLPPEYQKTFESLLTKHNFTYNLKID-NVQTHIDA----------- 100
             |..||          ..|:||...:.:||.:|......|:..:| ::..|.|.           
 Worm   903 EHGQESLLKSITPEVEQQILLPISRENSFEEMLPAPQEAYDEDLDQDIDIHFDGAESVCTGIRLD 967

  Fly   101 QRPKQRITSMEWTQFHTLEEIYAWLDVIEDR--------------------YPDIVTPFTIGNSY 145
            ...::.:.|.:..:....|.:.|..:.|...                    :|::..||...|.:
 Worm   968 SEDRELVDSPDQVENEEPERVEAVTENIRQEMSDAEMRDLMRKKREQYSMLFPNVPQPFQPLNRF 1032

  Fly   146 E-GRPIRGVKISYKEG---NPAVFIESNIHAR-EWITSATITYFI-DELLVPRNPAVRD-----I 199
            : ..|..|:...|.|.   :.:.::|.: |.| ..:::..|...: |:.||.....|.:     :
 Worm  1033 DVTAPGAGIVPPYDEAPDFDLSAYLEED-HVRIPTLSTVEINSLLKDQDLVEEQEIVEEEETPLV 1096

  Fly   200 AQNVDWYIIPVLNTD-------------------GFAYS--------HEVERLWRKSRLPSDPTG 237
            .:..|....|||:.:                   .|.|:        .|||.:.....:.:|...
 Worm  1097 VEEPDIPAAPVLSAEEKASRISREMSALRKLPDAAFNYASDRDGVVVEEVETIEEIQEIYNDKLE 1161

  Fly   238 ECI---------GTDLNR-NFDYLWMLTGAESDPCSQLYAGPSPESDPEISQLTAYINNSIPEGT 292
            :.|         |.::.| :.|.|....|:|.....::......||..|:.     :|.|:.   
 Worm  1162 KMIAARLGSIAQGANIERLSEDQLLGDQGSEDISFEEIQVDLLLESGVEVQ-----VNQSVT--- 1218

  Fly   293 IKIYISLHSYGQYVLSPWGHTALEFPEHYPQMMHVA 328
                ||..|      :.:....:|.||.:|:.:.|:
 Worm  1219 ----ISRSS------TSFESLLVEDPEEHPEQLPVS 1244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14820NP_648060.1 Propep_M14 31..100 CDD:280416 18/104 (17%)
M14_CP_A-B_like 115..410 CDD:199844 49/282 (17%)
sdc-3NP_506703.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160165674
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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