DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prat2 and ADE4

DIOPT Version :9

Sequence 1:NP_523949.2 Gene:Prat2 / 38753 FlyBaseID:FBgn0041194 Length:547 Species:Drosophila melanogaster
Sequence 2:NP_014029.1 Gene:ADE4 / 855346 SGDID:S000004915 Length:510 Species:Saccharomyces cerevisiae


Alignment Length:507 Identity:161/507 - (31%)
Similarity:257/507 - (50%) Gaps:53/507 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 CGVFAAIACGDYPTQLDIAQMICLGLVALQHRGQESAGIVTSLGKSSKNFSVHKGMGMINNLFND 122
            ||:...:....   ...:|..:|.|.:.||||||::|||.| .|...:.:.. ||.||..::|..
Yeast     2 CGILGIVLANQ---TTPVAPELCDGCIFLQHRGQDAAGIAT-CGSRGRIYQC-KGNGMARDVFTQ 61

  Fly   123 EAIRKLKGNLGIGHTRYSTAAASEVVNCQPFVVHTAHGALAIAHNGELVNCESLRR---EVLERG 184
            :.:..|.|::||.|.||.||.:|.....|||.|::.:| :.:||||.|||..||:|   |.:.|.
Yeast    62 QRVSGLAGSMGIAHLRYPTAGSSANSEAQPFYVNSPYG-INLAHNGNLVNTASLKRYMDEDVHRH 125

  Fly   185 VGLSTHSDSELIAQSLCCAPEDVSEHDGPNWPARIRHFM----TLAPLSYSLV-VMHKDKIYAVR 244
            :  :|.|||||:........|..:::...|  ..:.|.:    .|....|:.| ::....::..|
Yeast   126 I--NTDSDSELLLNIFAAELEKHNKYRVNN--EDVFHALEGVYRLCRGGYACVGLLAGFALFGFR 186

  Fly   245 DSYGNRPLCLGKIVPVDAGHANINDQLAEGWVVSSESCGFLSIGARYVREVEPGEIIELSRN--- 306
            |..|.|||..|:         ..|....:.::::|||..|.:......|:::|||.:.:.:|   
Yeast   187 DPNGIRPLLFGE---------RENPDGTKDYMLASESVVFKAHNFTKYRDLKPGEAVIIPKNCSK 242

  Fly   307 ---GYRTVDIVE--RPDYKRMAFCIFEYVYFARSDSMFEGQMVYSARLQCGRQLARE-----SPL 361
               .::.|..:.  |||       :||||||||.||:.:|..||..||..|.:||..     .|.
Yeast   243 GEPEFKQVVPINSYRPD-------LFEYVYFARPDSVLDGISVYHTRLAMGSKLAENILKQLKPE 300

  Fly   362 DADLVSSVPESGTAAAHGYARESGLPFGEVLCKNRYVGRTFIQPSTRLRQLGVAKKFGALAQNVE 426
            |.|:|..||::....|...|...|.|:.|...||||||||||.|:.|.|...|.:|...:....:
Yeast   301 DIDVVIPVPDTARTCALECANVLGKPYREGFVKNRYVGRTFIMPNQRERVSSVRRKLNPMESEFK 365

  Fly   427 GKRIVLVDDSIVRGNTIGPIIKLLRDAGATEVHIRIASPPLQYPCYMGINIPTREELIANKLNAD 491
            ||::::||||||||.|...|:.:.:::|||:|:...|:|.::|....||::...:.|||.....:
Yeast   366 GKKVLIVDDSIVRGTTSKEIVNMAKESGATKVYFASAAPAIRYNHIYGIDLTDTKNLIAYNRTDE 430

  Fly   492 QLADHVGADSLAYLSVEGLVKAVQMNKAHVNPLKAGYCTACLTGEYPGGLPE 543
            ::|:.:|.:.:.|.|:|.|:...:.:|  :...:.|    ..||.|..|:.:
Yeast   431 EVAEVIGCERVIYQSLEDLIDCCKTDK--ITKFEDG----VFTGNYVTGVED 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prat2NP_523949.2 PurF 57..544 CDD:223112 161/507 (32%)
GPATase_N 58..340 CDD:238367 91/297 (31%)
PRTases_typeI 351..487 CDD:206754 53/140 (38%)
ADE4NP_014029.1 PRK09246 1..502 CDD:236427 161/507 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 81 1.000 Domainoid score I1998
eggNOG 1 0.900 - - E1_COG0034
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 224 1.000 Inparanoid score I758
Isobase 1 0.950 - 0.591673 Normalized mean entropy S1178
OMA 1 1.010 - - QHG60992
OrthoFinder 1 1.000 - - FOG0002622
OrthoInspector 1 1.000 - - otm46770
orthoMCL 1 0.900 - - OOG6_101156
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1034
SonicParanoid 1 1.000 - - X1724
TreeFam 1 0.960 - -
1312.710

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