DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prat2 and ppat

DIOPT Version :9

Sequence 1:NP_523949.2 Gene:Prat2 / 38753 FlyBaseID:FBgn0041194 Length:547 Species:Drosophila melanogaster
Sequence 2:NP_989313.1 Gene:ppat / 394937 XenbaseID:XB-GENE-972203 Length:508 Species:Xenopus tropicalis


Alignment Length:507 Identity:316/507 - (62%)
Similarity:380/507 - (74%) Gaps:17/507 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 GMTCECGVFAAIACGDYPTQLDIAQMICLGLVALQHRGQESAGIVTSLGKSSKNFSVHKGMGMIN 117
            |:..|||||..||.|.:|||||:..:|.||||.||||||||||||||.|.|...:.:||||||:|
 Frog     7 GIREECGVFGCIAAGSWPTQLDVPHVITLGLVGLQHRGQESAGIVTSDGSSVPTYKMHKGMGMVN 71

  Fly   118 NLFNDEAIRKL-KGNLGIGHTRYSTAAASEVVNCQPFVVHTAHGALAIAHNGELVNCESLRREVL 181
            ::|::|:::|| ..|||||||||||:..|.:.|||||||.|.||.:|:||||||||...|:|:|:
 Frog    72 HVFSEESLKKLHMSNLGIGHTRYSTSGNSALENCQPFVVETLHGKIAVAHNGELVNAARLKRKVM 136

  Fly   182 ERGVGLSTHSDSELIAQSLCCAPEDVSEHDGPNWPARIRHFMTLAPLSYSLVVMHKDKIYAVRDS 246
            ..||||||.||||||.|.|...|....:|.. :|.||||:.|...|.||||:|||.|.|||:||.
 Frog   137 RHGVGLSTSSDSELITQLLAFTPPQEEDHTA-DWIARIRNLMNETPTSYSLLVMHNDVIYAIRDP 200

  Fly   247 YGNRPLCLGKIVPVDAGHANINDQLAEGWVVSSESCGFLSIGARYVREVEPGEIIELSRNGYRTV 311
            |||||||:|:::||:...........||||||||||.||||||.|.||:.||||:::||.|.:|:
 Frog   201 YGNRPLCIGRLMPVNNEGRGKRSAETEGWVVSSESCSFLSIGAEYYREILPGEIVKISREGVQTL 265

  Fly   312 DIVERPDYKRMAFCIFEYVYFARSDSMFEGQMVYSARLQCGRQLARESPLDADLVSSVPESGTAA 376
            |||.|.:....||||||||||||.||:||||||||.|.:||:|||.|:|::|||||:||||.|.|
 Frog   266 DIVPRTNGDPSAFCIFEYVYFARPDSIFEGQMVYSVRRRCGQQLAIEAPVEADLVSTVPESATPA 330

  Fly   377 AHGYARESGLPFGEVLCKNRYVGRTFIQPSTRLRQLGVAKKFGALAQNVEGKRIVLVDDSIVRGN 441
            |.|||.:.||.:.||||||||||||||||:.||||||||||||.|:.|..|||:||:||||||||
 Frog   331 ALGYAEKCGLQYVEVLCKNRYVGRTFIQPNMRLRQLGVAKKFGVLSDNFVGKRVVLIDDSIVRGN 395

  Fly   442 TIGPIIKLLRDAGATEVHIRIASPPLQYPCYMGINIPTREELIANKLNADQLADHVGADSLAYLS 506
            ||.||||||||:||.|||||:||||::|||||||||||:||||||:...:.||.::||||:.|||
 Frog   396 TISPIIKLLRDSGAKEVHIRVASPPIKYPCYMGINIPTKEELIANRPEFNDLAGYIGADSVVYLS 460

  Fly   507 VEGLVKAVQMN----KAHVNPLKA-------GYCTACLTGEYPGGLPEELSW 547
            ||||..||:..    |...|.:..       |:|||||||||    |.||.|
 Frog   461 VEGLTAAVREGVKAFKDEQNGINGKTKSSSHGHCTACLTGEY----PVELEW 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prat2NP_523949.2 PurF 57..544 CDD:223112 312/498 (63%)
GPATase_N 58..340 CDD:238367 169/282 (60%)
PRTases_typeI 351..487 CDD:206754 104/135 (77%)
ppatNP_989313.1 PurF 8..506 CDD:223112 312/502 (62%)
GPATase_N 12..294 CDD:238367 169/282 (60%)
PRTases_typeI 305..440 CDD:206754 103/134 (77%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 161 1.000 Domainoid score I3972
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H68272
Inparanoid 1 1.050 635 1.000 Inparanoid score I824
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D257834at33208
OrthoFinder 1 1.000 - - FOG0002622
OrthoInspector 1 1.000 - - otm48392
Panther 1 1.100 - - O PTHR11907
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1034
SonicParanoid 1 1.000 - - X1724
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.190

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