DRSC/TRiP Functional Genomics Resources

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Protein Alignment vvl and POU5F1B

DIOPT Version :10

Sequence 1:NP_001303384.1 Gene:vvl / 38752 FlyBaseID:FBgn0086680 Length:742 Species:Drosophila melanogaster
Sequence 2:NP_001153014.1 Gene:POU5F1B / 5462 HGNCID:9223 Length:359 Species:Homo sapiens


Alignment Length:396 Identity:142/396 - (35%)
Similarity:173/396 - (43%) Gaps:120/396 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 SPSPNGQGNG---------------------GGLGLGSGSGLGS--WSALH-PDPWMQTHHTHHL 101
            ||.|.|.|:|                     ||.|:|.|.|.||  |.... |.|:         
Human    12 SPPPGGGGDGPWGAEPGWVDPLTWLSFQGPPGGPGIGPGVGPGSEVWGIPPCPPPY--------- 67

  Fly   102 PAAAAVASAADTVKQEMSHLSQQTRIQQGMASPHAAWHAPHAG-HYAPTGGSPLQYHHAMNGMLH 165
                                    .:..||     |:..|..| ...|.||.......:..|:..
Human    68 ------------------------ELCGGM-----AYCGPQVGVGLVPQGGLETSQPESEAGVGV 103

  Fly   166 HPAHAVAAAHHQSVAPLHHTLRGESPQLHIHHHMGGGDRDAISGGEEDTPTSDD-------LEAF 223
            ......|:....:|.|  ..::.|..:|                 |::...|.|       ||.|
Human   104 ESNSNGASPEPCTVPP--GAVKLEKEKL-----------------EQNPEKSQDIKALQKELEQF 149

  Fly   224 AKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEADST 288
            ||..||:||.||:|||||||.||.|:|.||||.||||||||||||||||||:||||||:||||:.
Human   150 AKLLKQKRITLGYTQADVGLILGVLFGKVFSQKTICRFEALQLSFKNMCKLRPLLQKWVEEADNN 214

  Fly   289 TGSPTSIDKIA-----AQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEITSLADSLQLEKEVV 348
                .::.:|.     .|.||| ||||||..|:|.||..|.:.|||:.| |:.:|..|.|||:||
Human   215 ----ENLQEICKAETLMQARKR-KRTSIENRVRGNLENLFLQCPKPTLQ-ISHIAQQLGLEKDVV 273

  Fly   349 RVWFCNRRQKEKRMTPPNT------LGGDMMDGMP------PG-HMHHGGYHPHHDMHGSPMGTH 400
            ||||||||||.||.:....      ..|....|.|      || |....||       |||..|.
Human   274 RVWFCNRRQKGKRSSSDYAQREDFEAAGSPFSGGPVSFPPAPGPHFGTPGY-------GSPHFTA 331

  Fly   401 SHSHSP 406
            .:|..|
Human   332 LYSSVP 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vvlNP_001303384.1 POU 212..286 CDD:197673 54/80 (68%)
Homeodomain 305..361 CDD:459649 34/55 (62%)
POU5F1BNP_001153014.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..53 11/40 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 87..116 4/28 (14%)
POU 138..212 CDD:197673 53/73 (73%)
Homeodomain 231..286 CDD:459649 35/56 (63%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 287..322 6/34 (18%)

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