DRSC/TRiP Functional Genomics Resources

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Protein Alignment vvl and POU5F1B

DIOPT Version :9

Sequence 1:NP_001303384.1 Gene:vvl / 38752 FlyBaseID:FBgn0086680 Length:742 Species:Drosophila melanogaster
Sequence 2:NP_001153014.1 Gene:POU5F1B / 5462 HGNCID:9223 Length:359 Species:Homo sapiens


Alignment Length:396 Identity:142/396 - (35%)
Similarity:173/396 - (43%) Gaps:120/396 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 SPSPNGQGNG---------------------GGLGLGSGSGLGS--WSALH-PDPWMQTHHTHHL 101
            ||.|.|.|:|                     ||.|:|.|.|.||  |.... |.|:         
Human    12 SPPPGGGGDGPWGAEPGWVDPLTWLSFQGPPGGPGIGPGVGPGSEVWGIPPCPPPY--------- 67

  Fly   102 PAAAAVASAADTVKQEMSHLSQQTRIQQGMASPHAAWHAPHAG-HYAPTGGSPLQYHHAMNGMLH 165
                                    .:..||     |:..|..| ...|.||.......:..|:..
Human    68 ------------------------ELCGGM-----AYCGPQVGVGLVPQGGLETSQPESEAGVGV 103

  Fly   166 HPAHAVAAAHHQSVAPLHHTLRGESPQLHIHHHMGGGDRDAISGGEEDTPTSDD-------LEAF 223
            ......|:....:|.|  ..::.|..:|                 |::...|.|       ||.|
Human   104 ESNSNGASPEPCTVPP--GAVKLEKEKL-----------------EQNPEKSQDIKALQKELEQF 149

  Fly   224 AKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEADST 288
            ||..||:||.||:|||||||.||.|:|.||||.||||||||||||||||||:||||||:||||:.
Human   150 AKLLKQKRITLGYTQADVGLILGVLFGKVFSQKTICRFEALQLSFKNMCKLRPLLQKWVEEADNN 214

  Fly   289 TGSPTSIDKIA-----AQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEITSLADSLQLEKEVV 348
                .::.:|.     .|.||| ||||||..|:|.||..|.:.|||:.| |:.:|..|.|||:||
Human   215 ----ENLQEICKAETLMQARKR-KRTSIENRVRGNLENLFLQCPKPTLQ-ISHIAQQLGLEKDVV 273

  Fly   349 RVWFCNRRQKEKRMTPPNT------LGGDMMDGMP------PG-HMHHGGYHPHHDMHGSPMGTH 400
            ||||||||||.||.:....      ..|....|.|      || |....||       |||..|.
Human   274 RVWFCNRRQKGKRSSSDYAQREDFEAAGSPFSGGPVSFPPAPGPHFGTPGY-------GSPHFTA 331

  Fly   401 SHSHSP 406
            .:|..|
Human   332 LYSSVP 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vvlNP_001303384.1 POU 212..286 CDD:197673 54/80 (68%)
Homeobox 307..360 CDD:278475 33/52 (63%)
POU5F1BNP_001153014.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..53 11/40 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 87..116 4/28 (14%)
POU 138..212 CDD:197673 53/73 (73%)
Homeobox 233..285 CDD:278475 33/52 (63%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 287..322 6/34 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165156630
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11636
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.940

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