DRSC/TRiP Functional Genomics Resources

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Protein Alignment vvl and POU4F3

DIOPT Version :10

Sequence 1:NP_001303384.1 Gene:vvl / 38752 FlyBaseID:FBgn0086680 Length:742 Species:Drosophila melanogaster
Sequence 2:NP_002691.1 Gene:POU4F3 / 5459 HGNCID:9220 Length:338 Species:Homo sapiens


Alignment Length:328 Identity:128/328 - (39%)
Similarity:171/328 - (52%) Gaps:59/328 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 PSPNGQGNGGGLGLGSGSGLGSWSAL-----------HPDPWMQTHHTHHLPAAAAVASAADTVK 115
            |:|..|||  ..|....|.|....||           ||   .:...|:|..::....|.:.|| 
Human    37 PAPQLQGN--IFGSFDESLLARAEALAAVDIVSHGKNHP---FKPDATYHTMSSVPCTSTSSTV- 95

  Fly   116 QEMSHLSQQTRIQQGMASPHAAWHAPHAG-------HYAPT---GGSPLQYHHAMNGMLHHPAHA 170
             .:||.:..|      :.||   ||.|.|       |.:||   .|.....|..|...: ||.|.
Human    96 -PISHPAALT------SHPH---HAVHQGLEGDLLEHISPTLSVSGLGAPEHSVMPAQI-HPHHL 149

  Fly   171 VAAAH-HQSVAPLH-HTLRGESPQLHIHHHMGGGDRDAISGGEEDTPTSDDLEAFAKQFKQRRIK 233
            .|..| ||::...| ||:   :|    |..|..    .:|..|.|   ..:|||||::|||||||
Human   150 GAMGHLHQAMGMSHPHTV---AP----HSAMPA----CLSDVESD---PRELEAFAERFKQRRIK 200

  Fly   234 LGFTQADVGLALGTL----YGNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEADSTTGSPTS 294
            ||.||||||.||..|    .|:: ||:||||||:|.||..||..|||:||.|||||::......|
Human   201 LGVTQADVGAALANLKIPGVGSL-SQSTICRFESLTLSHNNMIALKPVLQAWLEEAEAAYREKNS 264

  Fly   295 IDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKE 359
            ..::.....:::|||||....|.:||.:|..||:||:::|.::|:.|.|:|.||||||||:|||:
Human   265 KPELFNGSERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQ 329

  Fly   360 KRM 362
            |||
Human   330 KRM 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vvlNP_001303384.1 POU 212..286 CDD:197673 47/77 (61%)
Homeodomain 305..361 CDD:459649 29/55 (53%)
POU4F3NP_002691.1 POU-IV box 56..65 2/8 (25%)
POU 179..256 CDD:197673 48/80 (60%)
Homeodomain 275..331 CDD:459649 29/55 (53%)

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