DRSC/TRiP Functional Genomics Resources

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Protein Alignment vvl and POU3F2

DIOPT Version :9

Sequence 1:NP_001303384.1 Gene:vvl / 38752 FlyBaseID:FBgn0086680 Length:742 Species:Drosophila melanogaster
Sequence 2:NP_005595.2 Gene:POU3F2 / 5454 HGNCID:9215 Length:443 Species:Homo sapiens


Alignment Length:460 Identity:225/460 - (48%)
Similarity:244/460 - (53%) Gaps:107/460 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AATSYMTPPSGDLDMALGGGGYHTSSPRSAADAGEMKYMQHH-HHHHAAAAAAAHHQLPSSPSPN 65
            |:..:..||.|   |..|.|||..:......|.|.::...|. .|.|....|.:|    ......
Human    16 ASIVHAEPPGG---MQQGAGGYREAQSLVQGDYGALQSNGHPLSHAHQWITALSH----GGGGGG 73

  Fly    66 GQGNGGGLGLGSGSGLGS-WSA----------------------LH-PDPWMQTHHTHHLPAAAA 106
            |.|.|||.|.|.|.|.|| ||.                      || |....|.|....      
Human    74 GGGGGGGGGGGGGGGDGSPWSTSPLGQPDIKPSVVVQQGGRGDELHGPGALQQQHQQQQ------ 132

  Fly   107 VASAADTVKQEMSHLSQQTRIQQGMASPHAAWHAPH-------------AGHYAPTGGSP---LQ 155
                    :|:.....||.:.||....||...||.:             |.|..|:.|:.   |.
Human   133 --------QQQQQQQQQQQQQQQQQRPPHLVHHAANHHPGPGAWRSAAAAAHLPPSMGASNGGLL 189

  Fly   156 YHH---AMNGM---------LHHPAHAVAAAHHQSVAPLHHTLRGESPQLHIHHHM--------- 199
            |..   .:|||         |||  |.:..||.:.....||      |..|.|.|.         
Human   190 YSQPSFTVNGMLGAGGQPAGLHH--HGLRDAHDEPHHADHH------PHPHSHPHQQPPPPPPPQ 246

  Fly   200 -----GGGDRDAISGGEEDTPTSDDLEAFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTIC 259
                 .|...|..|  :||||||||||.|||||||||||||||||||||||||||||||||||||
Human   247 GPPGHPGAHHDPHS--DEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTIC 309

  Fly   260 RFEALQLSFKNMCKLKPLLQKWLEEADSTTGSPTSIDKIAAQGRKRKKRTSIEVSVKGALEQHFH 324
            |||||||||||||||||||.||||||||::|||||||||||||||||||||||||||||||.||.
Human   310 RFEALQLSFKNMCKLKPLLNKWLEEADSSSGSPTSIDKIAAQGRKRKKRTSIEVSVKGALESHFL 374

  Fly   325 KQPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRMTPP-NTLGG--DMMDG---MPPGHMHH 383
            |.||||||||||||||||||||||||||||||||||||||| .||.|  |:..|   .||   ||
Human   375 KCPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRMTPPGGTLPGAEDVYGGSRDTPP---HH 436

  Fly   384 GGYHP 388
            |...|
Human   437 GVQTP 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vvlNP_001303384.1 POU 212..286 CDD:197673 71/73 (97%)
Homeobox 307..360 CDD:278475 49/52 (94%)
POU3F2NP_005595.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 64..171 29/124 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 201..267 19/75 (25%)
POU 262..336 CDD:197673 71/73 (97%)
Homeobox 357..411 CDD:395001 50/53 (94%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 409..443 18/36 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 139 1.000 Domainoid score I4786
eggNOG 1 0.900 - - E1_KOG3802
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 329 1.000 Inparanoid score I2455
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D328823at33208
OrthoFinder 1 1.000 - - FOG0000890
OrthoInspector 1 1.000 - - otm41281
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11636
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3844
SonicParanoid 1 1.000 - - X514
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1110.960

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