DRSC/TRiP Functional Genomics Resources

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Protein Alignment vvl and CCHCR1

DIOPT Version :9

Sequence 1:NP_001303384.1 Gene:vvl / 38752 FlyBaseID:FBgn0086680 Length:742 Species:Drosophila melanogaster
Sequence 2:NP_001381570.1 Gene:CCHCR1 / 54535 HGNCID:13930 Length:880 Species:Homo sapiens


Alignment Length:543 Identity:98/543 - (18%)
Similarity:182/543 - (33%) Gaps:161/543 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 LPAAAAVASAADTVKQEMSHLS---------QQTRIQQGM------------ASPHAAWHAPHAG 144
            |..:.|::..|:.:.:::..|.         ::|.:||.|            |....|..|...|
Human   179 LEGSQALSQQAEVIVRQLQELRRLEEEVRLLRETSLQQKMRLEAQAMELEALARAEKAGRAEAEG 243

  Fly   145 HYAPTGGSPLQYHHAMNG---------MLH-HPAHAVAAAHHQSVAPLHHTLRGESPQLHIHHHM 199
            ..|...|:.:...:...|         .|| ....::..||.::::.|.....|....|......
Human   244 LRAALAGAEVVRKNLEEGSQRELEEVQRLHQEQLSSLTQAHEEALSSLTSKAEGLEKSLSSLETR 308

  Fly   200 GGGDRDAISGGEED--------TPTSDDLEA--------------------FAKQFKQRRIKLGF 236
            ..|:...::..:.:        :.|.:||||                    .::.::..|.||..
Human   309 RAGEAKELAEAQREAELLRKQLSKTQEDLEAQVTLVENLRKYVGEQVPSEVHSQTWELERQKLLE 373

  Fly   237 TQADVGLALGTLYG-------NVFSQTTICRF------------EALQLSFKNMCKLKPLLQKW- 281
            |...:.....:|:.       .|.|.|.|...            ::|:..|...|  :.||.:| 
Human   374 TMQHLQEDRDSLHATAELLQVRVQSLTHILALQEEELTRKVQPSDSLEPEFTRKC--QSLLNRWR 436

  Fly   282 --------------LEEADST---TGSPTSI-DKIAAQGRK--------RKKRTSIEVSVKGA-- 318
                          ||.:||.   .|...|: :|:.:|.::        :.|...:||...||  
Human   437 EKVFALMVQLKAQELEHSDSVKQLKGQVASLQEKVTSQSQEQAILQRSLQDKAAEVEVERMGAKG 501

  Fly   319 --LEQHFHKQPKPSAQEITSLA-DSLQLEKEVV---RVWFCNRRQKEKRMTPPNTLGGDMMDGMP 377
              ||....::.:...|:.|:.| :.|:|....|   ::|.      |..|.........:     
Human   502 LQLELSRAQEARRRWQQQTASAEEQLRLVVNAVSSSQIWL------ETTMAKVEGAAAQL----- 555

  Fly   378 PGHMHHGGY--HPHHDMHG--------SPMGTHSHSHSPPM----LSPQNM---QSSAVAAHQLA 425
            |...:...|  ...|.:.|        :.:...|....||:    |..|.:   ::...|..||:
Human   556 PSLNNRLSYAVRKVHTIRGLIARKLALAQLRQESCPLPPPVTDVSLELQQLREERNRLDAELQLS 620

  Fly   426 AH-XQSEIQESNSAAAASTPASLNSLSQQQQQQQQQQQQ-------QHQQQQQHQQQQHTPNTPS 482
            |.  |.|:..:.....|.. ..|:.::||.:|:.||.|:       |.:..:|.||:        
Human   621 ARLIQQEVGRAREQGEAER-QQLSKVAQQLEQELQQTQESLASLGLQLEVARQGQQE-------- 676

  Fly   483 SSAGSSATMTSQVMSPQSPLGSS 505
             |...:|::..::...|...|.:
Human   677 -STEEAASLRQELTQQQELYGQA 698

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vvlNP_001303384.1 POU 212..286 CDD:197673 22/135 (16%)
Homeobox 307..360 CDD:278475 14/60 (23%)
CCHCR1NP_001381570.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3802
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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