DRSC/TRiP Functional Genomics Resources

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Protein Alignment vvl and POU3F1

DIOPT Version :9

Sequence 1:NP_001303384.1 Gene:vvl / 38752 FlyBaseID:FBgn0086680 Length:742 Species:Drosophila melanogaster
Sequence 2:NP_002690.3 Gene:POU3F1 / 5453 HGNCID:9214 Length:451 Species:Homo sapiens


Alignment Length:435 Identity:203/435 - (46%)
Similarity:222/435 - (51%) Gaps:135/435 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 SGDLDMALGGGGYHTSSPRSAADAGEMKYMQHHHHHHAAAA----AAAHHQLPS-SPSPNGQG-- 68
            :|..|...||||:|..             :.|....||.||    :.|||..|: ||||...|  
Human   100 TGRADDGGGGGGFHAR-------------LVHQGAAHAGAAWAQGSTAHHLGPAMSPSPGASGGH 151

  Fly    69 --------------NGGGLGL-------GSGSGLGSWSALHPDPWMQTHHTHHLPAAAAVASAAD 112
                          .|||.||       |.|:|.|...|||.|                      
Human   152 QPQPLGLYAQAAYPGGGGGGLAGMLAAGGGGAGPGLHHALHED---------------------- 194

  Fly   113 TVKQEMSHLSQQTRIQQGMASPHAAWHAPHAGHYAPTGGSPLQYHHAMNGMLHHPAHAVAAAHHQ 177
                  .|.:|    .:....||...|. ||..:|..||                .||.||    
Human   195 ------GHEAQ----LEPSPPPHLGAHG-HAHGHAHAGG----------------LHAAAA---- 228

  Fly   178 SVAPLHHTLRGESPQLHIHHHMGGGDRDAISGGEEDTPTSDDLEAFAKQFKQRRIKLGFTQADVG 242
                            |:|...|||........:||.|:|||||.||||||||||||||||||||
Human   229 ----------------HLHPGAGGGGSSVGEHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVG 277

  Fly   243 LALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEADSTTGSPTSIDKIAAQGRKRKK 307
            ||||||||||||||||||||||||||||||||||||.|||||.||::||||::||||||||||||
Human   278 LALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETDSSSGSPTNLDKIAAQGRKRKK 342

  Fly   308 RTSIEVSVKGALEQHFHKQPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRMTPPNTLGGDM 372
            ||||||.||||||.||.|.|||||.|||.||||||||||||||||||||||||||||....|...
Human   343 RTSIEVGVKGALESHFLKCPKPSAHEITGLADSLQLEKEVVRVWFCNRRQKEKRMTPAAGAGHPP 407

  Fly   373 MDGM----------------------PPGHMHHGGYHPHHDMHGS 395
            ||.:                      ||..:||   |.||.:.||
Human   408 MDDVYAPGELGPGGGGASPPSAPPPPPPAALHH---HHHHTLPGS 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vvlNP_001303384.1 POU 212..286 CDD:197673 69/73 (95%)
Homeobox 307..360 CDD:278475 46/52 (88%)
POU3F1NP_002690.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 69..114 6/13 (46%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 127..154 10/26 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 186..253 27/135 (20%)
POU 247..321 CDD:197673 69/73 (95%)
Homeobox 342..396 CDD:395001 47/53 (89%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 395..451 17/58 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165156623
Domainoid 1 1.000 139 1.000 Domainoid score I4786
eggNOG 1 0.900 - - E1_KOG3802
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 329 1.000 Inparanoid score I2455
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D328823at33208
OrthoFinder 1 1.000 - - FOG0000890
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR11636
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3844
SonicParanoid 1 1.000 - - X514
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1110.890

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