DRSC/TRiP Functional Genomics Resources

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Protein Alignment vvl and POU2F2

DIOPT Version :9

Sequence 1:NP_001303384.1 Gene:vvl / 38752 FlyBaseID:FBgn0086680 Length:742 Species:Drosophila melanogaster
Sequence 2:XP_016882373.1 Gene:POU2F2 / 5452 HGNCID:9213 Length:723 Species:Homo sapiens


Alignment Length:663 Identity:192/663 - (28%)
Similarity:266/663 - (40%) Gaps:156/663 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 SSPRSAADAGEMKYMQHHHHHHAAAAAAAHHQLPSSPSPNGQGNGGGLGLGSGSGLGSWSALHPD 90
            ||..:||:|..           |||||:|.....||.|.:...:.......||.|    ....|.
Human   151 SSAAAAANAAA-----------AAAAASASSSTSSSSSSSASSSTSQPPASSGGG----DLPPPQ 200

  Fly    91 PWMQTHHTHHLPAAAAVASAADTVKQEMSHLSQQTRIQQGMASPHAAWHAPHAGHYAPTGGSPLQ 155
            |..|...|..|..:..:...|..: |::..|.|...:......|.|.:..|.|....|       
Human   201 PASQPPGTPQLTLSQPIQLTAQDI-QQLLQLQQLVLVPGHHLQPPAQFLLPQAQQSQP------- 257

  Fly   156 YHHAMNGMLHHP---------AHAVAAAHHQSVAPLHHTLRGESPQLHIHHHMGGGDRDAISGGE 211
                  |:|..|         ..|:..:..::..|.....|...|..|:.|.......:..|..|
Human   258 ------GLLPTPNLFQLPQQTQGALLTSQPRAGLPTQAVTRPTLPDPHLSHPQPPKCLEPPSHPE 316

  Fly   212 EDTPTSDDLEAFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKP 276
            |.:.. ::||.||:.||||||||||||.|||||:|.||||.||||||.|||||.|||||||||||
Human   317 EPSDL-EELEQFARTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKP 380

  Fly   277 LLQKWLEEA-----DSTTGSPTSIDKIA-----AQGRKRKKRTSIEVSVKGALEQHFHKQPKPSA 331
            ||:|||.:|     ||:..||..:...:     ..||:||||||||.:|:.|||:.|....||::
Human   381 LLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLPGRRRKKRTSIETNVRFALEKSFLANQKPTS 445

  Fly   332 QEITSLADSLQLEKEVVRVWFCNRRQKEKRMTPPNTLGGDMMDGMPPGHMHHGGYHPHHDMHGSP 396
            :||..:|:.|.:||||:|||||||||||||:.|.:..                   |.....|.|
Human   446 EEILLIAEQLHMEKEVIRVWFCNRRQKEKRINPCSAA-------------------PMLPSPGKP 491

  Fly   397 MGTHSHSHSPPMLSPQNMQSSAVAAHQLAAHXQSEIQESNSAAAASTPA--------------SL 447
            .     |:||.|::||. .:..:...|.::. .:.:...:||.....|:              .|
Human   492 A-----SYSPHMVTPQG-GAGTLPLSQASSSLSTTVTTLSSAVGTLHPSRTAGGGGGGGGAAPPL 550

  Fly   448 NSL-SQQQQQQQQQQQQQHQQQQQHQQ---QQHTPNTPSSSAGSSATMTSQVMSPQSPLGS---- 504
            ||: |................|..|..   ....|:|.|:..|.|:.::..:|| .:||.:    
Human   551 NSIPSVTPPPPATTNSTNPSPQGSHSAIGLSGLNPSTGSTMVGLSSGLSPALMS-NNPLATIQAL 614

  Fly   505 SSAGNQANNNNNNNNNNNSSTNNNNNNNNNEEQVKHHQQQQQQQQASSIAAAAAAA-----MYMD 564
            :|.|.....:.:.:.|                               .:..||.||     :...
Human   615 ASGGTLPLTSLDGSGN-------------------------------LVLGAAGAAPGSPGLVTS 648

  Fly   565 PMRYQHPHHPHPHPHQHPHLNPAHHPHLFHTSDQLQHSQQQTVGGTSSNSQLSPGAGSNSGLPLQ 629
            |:...|...|                 |..|...:...........:|.|..|||..|:|.    
Human   649 PLFLNHAGLP-----------------LLSTPPGVGLVSAAAAAVAASISSKSPGLSSSSS---- 692

  Fly   630 PPSSASPAGSASS 642
              ||:|.:.|..|
Human   693 --SSSSSSSSTCS 703

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vvlNP_001303384.1 POU 212..286 CDD:197673 55/78 (71%)
Homeobox 307..360 CDD:278475 31/52 (60%)
POU2F2XP_016882373.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165156625
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3802
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.740

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