Protein Alignment vvl and acj6

DIOPT Version :10

• Sequence 1: NP_001303384.1
• Gene: vvl / 38752
• FlyBaseID: FBgn0086680
• Length: 742
• Species: Drosophila melanogaster
• Sequence 2: NP_524876.1
• Gene: acj6 / 47080
• FlyBaseID: FBgn0000028
• Length: 396
• Species: Drosophila melanogaster
• Alignment Length: 410
• Identity: 137/410 - (33%)
• Similarity: 184/410 - (44%)
• Gaps: 99/410 - (24%)

  Fly     1 MAATSYMTPPSGDLDMALGGGGYHTSSPRSAADAGEMKYMQHHHHHHAAAAAAAHHQLPSSPSPN 65
            :...|:....:||:...:..|....:...:|.|      :|.|...|      .|.|:||.
  Fly    62 LLCNSWSARQNGDIFAGINDGILSRAEALAAVD------IQKHQAQH------VHSQMPSQ---- 110

  Fly    66 GQGNGGGLGLGSGSGLGSWSALHPDPWMQTHHTHHLPAAAAVASAADTVKQEMSHLSQQTRIQQG 130
                                 :..|. |..||:...|....:..  :...::|.|...|.    .
  Fly   111 ---------------------IKHDV-MYHHHSMSGPPQRPLQE--NPFSRQMHHSMDQL----D 147

  Fly   131 MASPHAAWHAPHAGHYAPTGGSPL----QY----HHAMNGMLHHPAHAVAAAHHQSVAPLHHTLR 187
            |..|..:...     .||...|||    |:    :|:||.|:.|        ||..      ||.
  Fly   148 MLDPTGSMTT-----LAPISESPLTPTHQHLHGSYHSMNHMMSH--------HHPG------TLS 193

  Fly   188 GESPQLHIH---HHMGGGDRDAISGGEEDTPTSD-DLEAFAKQFKQRRIKLGFTQADVGLALGTL 248
            |.:...|.|   ||.......|.:|...||.|.. :|||||::|||||||||.||||||.||..|
  Fly   194 GHTGGHHGHSAVHHPVITAAVAAAGLHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANL 258

  Fly   249 Y---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEADSTTGS----PTSIDKIAAQGRKRK 306
            .   ....||:||||||:|.||..||..|||:||.|||||::...:    |.:...:.| |.|::
  Fly   259 KLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKR 322

  Fly   307 KRTSIEVSVKGALEQHFHKQPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKR----MTPPNT 367
            |||||....|.:||.:|..||:||.::|.::|:.|.|:|.||||||||:|||:||    :||..|
  Fly   323 KRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRIVSSVTPSMT 387

  Fly   368 LGGDMMDGMPPGHMHHG-GY 386
                       ||...| ||
  Fly   388 -----------GHGSAGFGY 396

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vvl	NP_001303384.1	POU	212..286	CDD:197673	48/77 (62%)
		Homeodomain	305..361	CDD:459649	29/55 (53%)
acj6	NP_524876.1	POU	222..299	CDD:197673	48/76 (63%)
		Homeodomain	321..377	CDD:459649	29/55 (53%)