Sequence 1: | NP_001303384.1 | Gene: | vvl / 38752 | FlyBaseID: | FBgn0086680 | Length: | 742 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001167617.1 | Gene: | LMX1B / 4010 | HGNCID: | 6654 | Length: | 406 | Species: | Homo sapiens |
Alignment Length: | 255 | Identity: | 55/255 - (21%) |
---|---|---|---|
Similarity: | 80/255 - (31%) | Gaps: | 67/255 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 283 EEADSTTGSPTSIDKIAAQG----------------RKRKKRTSIEVSVKGALEQHFHKQPKPSA 331
Fly 332 QEITSLADSLQLEKEVVRVWFCNRRQKEKRMTPPNTLGGDMMDGMPPGHMHHGGYHPHHDMHGSP 396
Fly 397 MGTHSHSHSPPMLSPQNMQSSAVAAHQLAAHXQSEIQESNSAAAASTPASLNSLSQQQQQQQQQQ 461
Fly 462 QQQHQQQQQHQQQQHTPNTPSSSA-----GSSATMTSQVMSPQSPLGSSSAGN-QANNNN 515 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
vvl | NP_001303384.1 | POU | 212..286 | CDD:197673 | 1/2 (50%) |
Homeobox | 307..360 | CDD:278475 | 17/52 (33%) | ||
LMX1B | NP_001167617.1 | LIM1_Lmx1b | 56..108 | CDD:188757 | |
LIM2_Lmx1a_Lmx1b | 115..169 | CDD:188764 | |||
Homeobox | 222..275 | CDD:278475 | 17/52 (33%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3844 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.940 |