Protein Alignment vvl and pou3f1

DIOPT Version :10

• Sequence 1: NP_001303384.1
• Gene: vvl / 38752
• FlyBaseID: FBgn0086680
• Length: 742
• Species: Drosophila melanogaster
• Sequence 2: NP_571236.1
• Gene: pou3f1 / 30398
• ZFINID: ZDB-GENE-980526-372
• Length: 368
• Species: Danio rerio
• Alignment Length: 431
• Identity: 198/431 - (45%)
• Similarity: 229/431 - (53%)
• Gaps: 95/431 - (22%)

  Fly     1 MAATSYMTP-----PSGDLDMALGGGGYHTSSPR--SAADAGEMKYMQHHHHHHAAAA------A 52
            ||.|:...|     ||..|        .|..|.|  ......|::.|.||.:....|.      :
Zfish     1 MATTAQYIPRNNSLPSNPL--------MHPDSDRMHQGTTYREVQKMMHHEYLQGLATNTGHPMS 57

  Fly    53 AAHHQ-LPSSPSP------NGQGNGGGLGLGSGSGLGSW---SALHPDPWMQTHHTHHLPAAAAV 107
            ..||| ||:|.:.      .||.......:.|...||:.   |.|...|...:||
Zfish    58 LTHHQWLPTSNTDWTSGTHIGQAEHNKASVQSREDLGNGYHRSHLVHQPTQNSHH---------- 112

  Fly   108 ASAADTVKQEMSHLSQQTRIQQGMASPHAAWHAPHAGHYAPTGGSPLQYHHAMNGMLHHPAHAVA 172
            .|.|.|....:|.||..:...|.:.             |:.||.:.|....:::..|..|.|..|
Zfish   113 GSWAPTTTHHLSPLSPASNGHQSLV-------------YSQTGYTMLSPQPSLHHGLRDPLHDDA 164

  Fly   173 AAHHQSVAPLHHTLRGESPQLHIHHHMGGGDRDAISGGEEDTPTSDDLEAFAKQFKQRRIKLGFT 237
            .:|...:         ||||....||....|        ||.|:|||||.|||||||||||||||
Zfish   165 GSHDNQM---------ESPQQPFSHHQDHSD--------EDAPSSDDLEQFAKQFKQRRIKLGFT 212

  Fly   238 QADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEADSTTGSPTSIDKIAAQG 302
            |||||||||||||||||||||||||||||||||||||||||.|||||.||.|||||::|||||||
Zfish   213 QADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETDSNTGSPTNLDKIAAQG 277

  Fly   303 RKRKKRTSIEVSVKGALEQHFHKQPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRMTPPNT 367
            |||||||||||.||||||.||.|.|||||.|||:||.:||||||||||||||||||||||||.
Zfish   278 RKRKKRTSIEVGVKGALENHFLKCPKPSAHEITTLAGTLQLEKEVVRVWFCNRRQKEKRMTPV-- 340

  Fly   368 LGGDMMDGMPPGHMHHGGYHPHHDMHGSPMGTHSHSHSPPM 408
                   |:|         ||..:      ..:|.:.:||:
Zfish   341 -------GVP---------HPTME------DVYSQAETPPL 359

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vvl	NP_001303384.1	POU	212..286	CDD:197673	69/73 (95%)
		Homeodomain	305..361	CDD:459649	47/55 (85%)
pou3f1	NP_571236.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..28		10/34 (29%)
		AF-4	<46..>177	CDD:461550	37/162 (23%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	69..88		2/18 (11%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	100..134		11/43 (26%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	147..193		15/62 (24%)
		POU	187..261	CDD:197673	69/73 (95%)
		Homeodomain	280..336	CDD:459649	47/55 (85%)