Protein Alignment vvl and Pou3f4

DIOPT Version :10

• Sequence 1: NP_001303384.1
• Gene: vvl / 38752
• FlyBaseID: FBgn0086680
• Length: 742
• Species: Drosophila melanogaster
• Sequence 2: NP_058948.1
• Gene: Pou3f4 / 29589
• RGDID: 61947
• Length: 361
• Species: Rattus norvegicus
• Alignment Length: 395
• Identity: 198/395 - (50%)
• Similarity: 214/395 - (54%)
• Gaps: 91/395 - (23%)

  Fly    47 HAAAAAAAHHQLPSSPSPNGQ------------GNGGGLGLGSGSGLGSWSALHPD--PWMQTHH 97
            ||.:|....    .||..|.|            .||..||       ..|.....|  ||..|..
  Rat    19 HADSAGMQQ----GSPFRNPQKLLQSDYLQGVPSNGHPLG-------HHWVTSLSDGGPWSSTLA 72

  Fly    98 THHLPAAAAVASAADTVKQEMSHLSQQTRIQQGMASPHAAWHAPHAGHYAPTGGSPL-------- 154
            |..|..........|.....:.|          ..|||.|.|:||..|....|.||.
  Rat    73 TSPLDQQDVKPGREDLQLGAIIH----------HRSPHVAHHSPHTNHPNAWGASPAPNSSITSS 127

  Fly   155 --------QYHHAMNGMLHH----PAHAVAAAHHQSVAPLHHTLRGESP---QLHIHHHMGGGDR 204
                    |....::|||.|    |..|.|     |...||..|| |.|   :|..||.....|
  Rat   128 GQPLNVYSQPGFTVSGMLEHGGLTPPPAAA-----STQSLHPVLR-EPPDHGELGSHHCQDHSD- 185

  Fly   205 DAISGGEEDTPTSDDLEAFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFK 269
                   |:|||||:||.|||||||||||||||||||||||||||||||||||||||||||||||
  Rat   186 -------EETPTSDELEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFK 243

  Fly   270 NMCKLKPLLQKWLEEADSTTGSPTSIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEI 334
            |||||||||.||||||||:|||||||||||||||||||||||||||||.||.||.|.|||:||||
  Rat   244 NMCKLKPLLNKWLEEADSSTGSPTSIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQEI 308

  Fly   335 TSLADSLQLEKEVVRVWFCNRRQKEKRMTPPNTLGGDMMDGMPPGHMHHGGYHPHHDMHGSPMGT 399
            :||||||||||||||||||||||||||||||                  |...| |:::...:.|
  Rat   309 SSLADSLQLEKEVVRVWFCNRRQKEKRMTPP------------------GDQQP-HEVYSHTVKT 354

  Fly   400 HSHSH 404
            .:..|
  Rat   355 DASCH 359

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vvl	NP_001303384.1	POU	212..286	CDD:197673	69/73 (95%)
		Homeodomain	305..361	CDD:459649	49/55 (89%)
Pou3f4	NP_058948.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	99..131		10/31 (32%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	144..192		21/61 (34%)
		POU	186..260	CDD:197673	69/73 (95%)
		Homeodomain	279..335	CDD:459649	49/55 (89%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	334..361		11/45 (24%)